Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0293 ATGTTGAACAACTCTGATACCACCACACCACCTCCACAGATCATCCAAATCCCACCACAAGTTCCACAGCAAAGGCTTTCATTCTCGGTCCCCATCAAGGCACAAGTTTCAAGCTTTCCTAACACAACAACAGTGGCGGCTCAAACAGCAAGAAGGGTCTTCAAGATTCTCTTCTACTTGCATTTGTTCCTAGTTGCAGCCTTGGTGACTTTCCTTACCATATATGGTCTTGTCTCTGATTCTCACACCCACCATTTCCACCCCAAGAAATGGTACCCTCCACTTCTTGCATCAACAGCATGTGCTGGAATTGTTGGTTTCACATGGCAATGGATCACTGCAAGCCACTCCACAAGGGTGGTTAGGTTGGTATTTTGGCTTAGTCCCCTTCTAACATGTGCAATGGGAATTATGTTTGTGTGCATTGGCACTGCAGTGAGTCTGGCAGTTGGTGTAATTGCTTTGGTTTGTGCATTAGTTCAATCCCTCTATTTTTGTTGGGTCAATCCTAGATTTGAATATGCCACAAAAATCTTGTCAGTTTCAGTAGCTTTTCCTCCAAACAGAACCCAGGGGCTAACCCTTTACTCAATCCTCATTGGAATCCTTTATTGCTGTTTTCTGTTGGCTGGGATTGGAGGGGCTAGAGCAATTGAAAACAGAACCCAACTAGCAGAATTTTTCATCTTCTTGATCTTGCTGAGCCTAGGGTGGACTATGCAGTTTCTGAAGAATGCAATGTATGTCACTATTTCAAGGGTCAAGTACATGCATTTTGCAGGAGGAGTTGACATGGACACTAGAGTGGCAGTTTGTGACACAATCAAGCACTTAACTGGAAGTGTTTCCATGGGCTCCATCCTCGTTCCCGTCATTGTGCTCTTCCGGGGTTTTGCACGAACCACGAGTCTGGTTGGAGGAGACACAGATGAATTCATGTTTTCCTGTGTTAGCTGCTATATGGGGGTAGCATCTCTTCTTGTGGTCCGTGGGAACCGGTGGGGTTTTGTGCATGTTGGAGTTTATAACAAAGGGTTTGTGCAGGCATCTTGTGATACTTGGGAGATGTTCATTAGAGTTGGATTGGAGCAACTCATAGACTTGGATCTCACAGGGGCATTCTGTTTCCTTAGTGGTGTTGGAACAGGTGCAATATGTAGTCTGGTGAGTGGAATTTGGAGTATTGTAATGCACAAGAGCTATGCCACAGAAGTGTCCATTTATGCTTTCCTCATTGGATATTTCATGTGTCGATTGGCTATTGCATGGGTACAAGCTTGTGTTTCAGCTTACTATGTTGCCTACGCAGAAAATCCACAGAGCACTCAGTTTGATTCCACTATTCCAATACGCTTGGAGCAGCTTAATAGATCTCAAGCTTTGCAAATATTCAGAGCTAATAATTTGAGCTGA 1413 0.443 MLNNSDTTTPPPQIIQIPPQVPQQRLSFSVPIKAQVSSFPNTTTVAAQTARRVFKILFYLHLFLVAALVTFLTIYGLVSDSHTHHFHPKKWYPPLLASTACAGIVGFTWQWITASHSTRVVRLVFWLSPLLTCAMGIMFVCIGTAVSLAVGVIALVCALVQSLYFCWVNPRFEYATKILSVSVAFPPNRTQGLTLYSILIGILYCCFLLAGIGGARAIENRTQLAEFFIFLILLSLGWTMQFLKNAMYVTISRVKYMHFAGGVDMDTRVAVCDTIKHLTGSVSMGSILVPVIVLFRGFARTTSLVGGDTDEFMFSCVSCYMGVASLLVVRGNRWGFVHVGVYNKGFVQASCDTWEMFIRVGLEQLIDLDLTGAFCFLSGVGTGAICSLVSGIWSIVMHKSYATEVSIYAFLIGYFMCRLAIAWVQACVSAYYVAYAENPQSTQFDSTIPIRLEQLNRSQALQIFRANNLS* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0293 470 PANTHER F20H23.27 PROTEIN-RELATED 30 459 - -
Gso16g0293 470 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 30 459 IPR007603 GO:0022857|GO:0055085
Gso16g0293 470 Pfam Plasma-membrane choline transporter 152 439 IPR007603 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0293 Gso-Chr16 3328996 3331919 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0293 - - gmx:100818674 924.465