Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0274 ATGTCCACCATGAAGAACAATTTCAAAGACCAAGACCATCTCTACTCTTCATGGAGCTTCTCAAAGCTAATGGCTTTCTTCTTCCTCTTAATCTCCATCTCCTACCTCTTCTACTCCCTAAGATTCGTTAGCCACTCTTATGATTGTGATCAAACCCCTCACAATCCCACCATCACTCATCATATTTCTTTCAACACCCCATCTGAAGAAGAGTCCACACCCCCCTTTGAAGAACTCACCAACATTTCCCACATAGTCTTTGGCATAGGAGCCTCAGCAAAGCTTTGGAAGCAGAGAAAAGAGTACATCAAGCTATGGTGGAGGCCTAATGAGATGCGAGGGGTTGTGTGGTTGGAGCAAAAGGTCAAAACTGAAGCTCAAAATGAGGACTTCTTGCCCCCATTGAGGATCTCTAGTGACACTTCAAGGTTCAAGTATAAGAACCAAAAGGGTCATAGATCAGCTATTAGAATCTCACGCATAGTGTCTGAGACACTCAGGCTTGGGATGGAGGGTGTGAGGTGGTTTGTGATGGGGGATGATGACACGGTTTTTGTGGCAGAGAATTTGGTGAAAGTGTTGCAGAAATATGACCACAATCAGTTTTATTACATTGGGAGTTCCTCAGAGAGTCACTTGCAAAACATTTATTTTTCTTATAACATGGCTTATGGGGGTGGTGGTTTTGCAATTAGTTATCCCTTGGCTGTGGCATTGGAGAAGATGCAAGATAGGTGCATTCAGAGGTATCCAGGGTTGTATGGCTCTGATGATAGGATTCAGGCTTGTATGGCAGAATTGGGAGTTCCACTCACCAAGGAAAAAGGGTTCCATCAGTTTGACGTGTACGGCAACCTCTTTGGGCTTCTTGCGGCCCATCCAGTTACACCACTGGTATCCCTCCATCACTTGGACGTGGTAGAGCCCATATTTCCAAACATGAGCCGGGTACAGGCCCTGAAGCGTCTGAATCGGCCCATGAAGTTGGACCCGGCTGGGCTCATACAACAATCAATTTGCTATGACAAAGCCCGGACCTGGACCATATCCGTTTCATGGGGCTATGCGGTTCAAATTTTCCGGGGCATCTTCTCAGCCCGGGAAATGGAGATGCCAGCAAGGACATTCCTGAACTGGTACAAGCGGGCGGATTACACGGCGTATCCGTTCAACACGCGGCCGGTCAGCCGCCATGTTTGTCAGAAACCGTTTGTTTATTACTTGTCTAGGGCAGTGTATGATGAGGGTGCTAATGAAACTGCAAGTCAATATGTACGGGTTCAGCAAAACCCGGAATGCAATTGGAAAATGGAGGATCCAACCCAAATCAAAGTGGTGCATGTTTATAAGAAACCCGACCCGCATTTGTGGGACAAGGCTCCAAGAAGAAATTGTTGTAGGGTTCGACGTACAAAGAAGCAAGGAACTATGGTGATTGATGTGGGGGAATGCAAGGAAGATGAACTTGTTGAATTGTAG 1479 0.4645 MSTMKNNFKDQDHLYSSWSFSKLMAFFFLLISISYLFYSLRFVSHSYDCDQTPHNPTITHHISFNTPSEEESTPPFEELTNISHIVFGIGASAKLWKQRKEYIKLWWRPNEMRGVVWLEQKVKTEAQNEDFLPPLRISSDTSRFKYKNQKGHRSAIRISRIVSETLRLGMEGVRWFVMGDDDTVFVAENLVKVLQKYDHNQFYYIGSSSESHLQNIYFSYNMAYGGGGFAISYPLAVALEKMQDRCIQRYPGLYGSDDRIQACMAELGVPLTKEKGFHQFDVYGNLFGLLAAHPVTPLVSLHHLDVVEPIFPNMSRVQALKRLNRPMKLDPAGLIQQSICYDKARTWTISVSWGYAVQIFRGIFSAREMEMPARTFLNWYKRADYTAYPFNTRPVSRHVCQKPFVYYLSRAVYDEGANETASQYVRVQQNPECNWKMEDPTQIKVVHVYKKPDPHLWDKAPRRNCCRVRRTKKQGTMVIDVGECKEDELVEL* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0274 492 Gene3D - 73 325 - -
Gso16g0274 492 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 1 490 - -
Gso16g0274 492 Pfam Protein of unknown function, DUF604 214 466 IPR006740 -
Gso16g0274 492 PANTHER FRINGE-RELATED 1 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0274 Gso-Chr16 3104936 3109754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0274 21 486 Glycosyltransferase AT5G41460 66.258 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0274 - - gmx:100790149 999.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0589 7 6223035 6228109 Gso16g0274 16 3104936 3109754 GST
Gso9g2114 9 45427844 45432474 Gso16g0274 16 3104936 3109754 PCT
Gso16g0274 16 3104936 3109754 Gso9g2114 9 45427844 45432474 PCT