Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0255 ATGTCGCAGTTGCTGGATAAAGCCAAGAACTTCGTGTCGGAGAAGGTAAATGATATGGCCAAGCCGGAGGCGAGTGTCACTGACGTGGACTTCAAGCGCGTGAGCAAAGATAATGTCGAGTACTTGGCCAAGGTCTCTGTTCGTAACCCTTATTCAACTTCCATACCCATTTGTGAGATCAACTACTCTTTCAAAAGCGCATCCAGGGAGATAGCATCAGGGAAAATTCCAGACCCAGGATCGTTGAAGGCAAAGGACACAACAATGGTGGATGTGCCAGTTAAGGTTCCATACAGCATATTGATGAGCTTGGCAAAGGACATTGGTGCTGACTGGGACATAGACTATCAATTGGATCTTGGTCTGGTTATTGATGTTCCTGTCATTGGCATCTTCACCATTCCTCTCTCTCAGAAAGGAGAGATCAAGCTACCAACCCTCTCTACCATGTTCGCCTAA 459 0.4662 MSQLLDKAKNFVSEKVNDMAKPEASVTDVDFKRVSKDNVEYLAKVSVRNPYSTSIPICEINYSFKSASREIASGKIPDPGSLKAKDTTMVDVPVKVPYSILMSLAKDIGADWDIDYQLDLGLVIDVPVIGIFTIPLSQKGEIKLPTLSTMFA* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0255 152 PANTHER - 1 152 IPR045043 -
Gso16g0255 152 PANTHER DESICCATION PROTECTANT PROTEIN LEA14 1 152 - -
Gso16g0255 152 Gene3D - 17 151 - -
Gso16g0255 152 SUPERFAMILY LEA14-like 1 150 - -
Gso16g0255 152 Pfam Late embryogenesis abundant protein 44 140 IPR004864 -
Gso16g0255 152 SMART why 24 141 IPR013990 GO:0009269
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0255 Gso-Chr16 2928538 2929848 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0255 - - gmx:547533 298.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1923 18 51631862 51634422 Gso16g0255 16 2928538 2929848 PCT
Gso9g2095 9 45249418 45251140 Gso16g0255 16 2928538 2929848 PCT
Gso16g0255 16 2928538 2929848 Gso18g1923 18 51631862 51634422 PCT
Gso16g0255 16 2928538 2929848 Gso9g2095 9 45249418 45251140 PCT