LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso16g0253	ATGCTAGAGACGGAGCAAGCAAGACCATTAGCCCCATCAATAGAGCGCCAAAGCAGCGATGAGGATAACACCACTCCACACCCTCAAACACAAGGCCACAAAAAACTCATCAAACGTTGTGCTTGCCCATTAATCTCTTTACTTCTCATAGCAATAGTGATCATAGTTTTAATCTTCACAGTATTTCGTGTCAAGGACCCCGTGATCACAATGAACAGCATCAAGATCACAAAGCTCCAACTTGTCAACACCATGTCACAACAACCCGGGGCCAACATGTCCTTAGTCGCTGACGTGTCGGTGAAGAACCCTAACGTTGCATCCTTTAGGTATAGCAACACCACCACGAGTTTGTACTACCATGGTGTCATTGTGGGGGAGGCTAGAGGACCACCTGGGAGGGCCAAGGCCAGAAGAACATTGAGGATGAATGTCACAATTGATGTCATCACCGCTCGCGTCATTTCTAGCCCGGATTTTGTGACGGATTTAGGTTCCGGGTTGTTGACTATGAGCAGCTTCTCTAGAGTTCCTGGGCAGGTCAAGATCTTGAACTTGATTAAGAGACATGTTGTTGTGAAAATGAATTGCACCACCACTTTTAATATTTCCACACAGGCGATTAAGGAGCAAAGTTGTAAGCGGAAGGTTAAACTTTAG	660	0.4591	MLETEQARPLAPSIERQSSDEDNTTPHPQTQGHKKLIKRCACPLISLLLIAIVIIVLIFTVFRVKDPVITMNSIKITKLQLVNTMSQQPGANMSLVADVSVKNPNVASFRYSNTTTSLYYHGVIVGEARGPPGRAKARRTLRMNVTIDVITARVISSPDFVTDLGSGLLTMSSFSRVPGQVKILNLIKRHVVVKMNCTTTFNISTQAIKEQSCKRKVKL*	220

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso16g0253	219	Pfam	Late embryogenesis abundant protein	99	198	IPR004864	-
	Gso16g0253	219	PANTHER	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	20	218	-	-
	Gso16g0253	219	SUPERFAMILY	LEA14-like	49	154	-	-
	Gso16g0253	219	MobiDBLite	consensus disorder prediction	11	31	-	-
	Gso16g0253	219	MobiDBLite	consensus disorder prediction	1	33	-	-
	Gso16g0253	219	PANTHER	LATE EMBRYOGENESIS ABUNDANT PROTEIN	20	218	-	-
	Gso16g0253	219	Gene3D	-	52	205	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso16g0253	Gso-Chr16	2914305	2915334	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso16g0253	-		-	gmx:100799820	400.979

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gso16g0253	16	2914305	2915334	Gso16g0253	16	2914305	2915334	ECH
	Gso7g0555	7	5657798	5658723	Gso16g0253	16	2914305	2915334	GST