Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0244 ATGAAGGATTCGAATTCGAATTCGGATCTGTTTGACCCGGTCATGGCGATGGAGTCCGAGTGGTCTCGCGGCGGCGGCGGCACCTCCGACGCCGATTTCGCCTTCGCCTTCAACGACAGCAACTTCTCCGACAGGGTTCTCCGGATCGAGATTATGAACGACCCCGTCGACGCCCGCCCCGATTCCGACGCCTGCGCCACCATTGCCGACTGGGCCCGCCACCGCAAGCGCCGCCGCGAGGATATCAAAAAGGATAACGGTGTGGATCTTGCTTCGGTGCCAGATGAGCAAGTTTTGAACGGGCATCAATCTGAAGTGGATGAGTGTGAGAATCAAGATGAAGAGCCTGATGCAATGGTTGAAGAACCTCATTCTGGTGATGAAGCTACAAACAGTAATGATTCAGACTGGAGCATGGATTGCTCTGCAGGTGCAGTTGTTAGAGTTAAAACACTGCATATCAGTTCTCCTATCCTGGCTGCTAAGAGTCCTTTCTTCTATAAGCTTTTCTCAAATGGGATGAAGGAGTCTGAGCAAAGACATGTCACCCTCAGAATTAATGCCTCTGAAGAGGTTGCTCTCATGGAGCTACTGAATTTTATGTACAGTAATACCTTGACCACTACTACGGCACCTGCATTGCTGGATGTGTTGATGGCTGCTGATAAATTTGAAGTTGCTTCATGCATGAGATATTGTAGCCGATTATTGCGGAATATGCCTATGACACCTGACTCTGCATTGCTTTATCTGGAGCTTCCTTCTAGTGTCTTAATGGCTGATGCAGTCCAACCATTGACTGATGCTGCAAAACAGTATCTTGCTGGTCGATACAAGGATATAACCAAGTTCCAGGAAGAAGTTATGGCCTTGCCCCTAGCTGGAGTAGAGGCAATATTGTCTAGTGATGATCTCCAGGTCGCATCAGAAGATGCTGTATATGATTTTGTGTTGAAGTGGTCTCGACAGCAGTACCCTAAACTGGAAGATAGGCGAGAAGTCCTGAGTGCCCGGCTTGCACGACTAATTCGCTTCCCTTACATGACCTGCCGAAAGCTTAAGAAGGTCTTGACCTGTTCCGACTTTGACCATGACATTGCATCCAAGCTTGTACTCGAGGGCCTATTTTTCAAGGCCGAGGCTCCGCACCGCCAACGGTCGCTGGCAGCAGAAGACTCCGCTTCTTCAAACCGTCGTTTTGTGGAGAGGGCATACAAGTACCGCCCCGTGAAGGTGGTAGAATTCGAACTTCCCCGGCAGCAGTGTGTGGTGTACTTGGATCTAAAGCGGGAGGAGTGTAACAACCTGTTCCCGTCCGGCCGGGTTTATTCTCAGGCATTCCATTTGGGTGGACAAGGTTTTTTCCTATCAGCACATTGCAACATGGACCAACAAAGCTCTTTCCATTGCTTTGGGCTGTTTTTGGGAATGCAGGAAAAGGGCTCAGTGAGCTTCGCCGTCGACTATGAGTTTGCTGCGAGGTCTAGGCCGACGGAGGAATTTGTTAGCAAGTACAAAGGCAACTACGTGTTCACAGGGGGAAAGGCCGTTGGCTATAGAAACTTGTTTGCTATTCCATGGACTTCGTTCATGGCCGAGGATAGTCTTTACTTTATCAATGGTGTCCTCCACCTTAGGGCTGAGCTCACAATCAAACACTGA 1662 0.4952 MKDSNSNSDLFDPVMAMESEWSRGGGGTSDADFAFAFNDSNFSDRVLRIEIMNDPVDARPDSDACATIADWARHRKRRREDIKKDNGVDLASVPDEQVLNGHQSEVDECENQDEEPDAMVEEPHSGDEATNSNDSDWSMDCSAGAVVRVKTLHISSPILAAKSPFFYKLFSNGMKESEQRHVTLRINASEEVALMELLNFMYSNTLTTTTAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPDSALLYLELPSSVLMADAVQPLTDAAKQYLAGRYKDITKFQEEVMALPLAGVEAILSSDDLQVASEDAVYDFVLKWSRQQYPKLEDRREVLSARLARLIRFPYMTCRKLKKVLTCSDFDHDIASKLVLEGLFFKAEAPHRQRSLAAEDSASSNRRFVERAYKYRPVKVVEFELPRQQCVVYLDLKREECNNLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARSRPTEEFVSKYKGNYVFTGGKAVGYRNLFAIPWTSFMAEDSLYFINGVLHLRAELTIKH* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0244 553 PANTHER OS02G0260700 PROTEIN 8 553 IPR045890 -
Gso16g0244 553 Pfam BTB/POZ domain 150 238 IPR000210 GO:0005515
Gso16g0244 553 MobiDBLite consensus disorder prediction 83 135 - -
Gso16g0244 553 Gene3D - 273 378 - -
Gso16g0244 553 Gene3D Potassium Channel Kv1.1; Chain A 130 261 IPR011333 -
Gso16g0244 553 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN POB1 8 553 - -
Gso16g0244 553 SMART BTB_4 141 241 IPR000210 GO:0005515
Gso16g0244 553 ProSiteProfiles BTB domain profile. 141 210 IPR000210 GO:0005515
Gso16g0244 553 CDD BTB_POZ_ZBTB_KLHL-like 146 224 - -
Gso16g0244 553 SUPERFAMILY POZ domain 150 238 IPR011333 -
Gso16g0244 553 SMART BACK_2 256 358 IPR011705 -
Gso16g0244 553 Pfam BTB And C-terminal Kelch 264 356 IPR011705 -
Gso16g0244 553 SUPERFAMILY TRAF domain-like 440 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0244 Gso-Chr16 2789470 2793344 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0244 - - gmx:100817612 1095.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0541 7 5455122 5458827 Gso16g0244 16 2789470 2793344 GST