Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0239 ATGATGGGTACCCTTAAGGTGTCCAACAGTAGTTTATACATATTTTCGAAGTTCCTAGTAATTTGTATGGTGATGATGATATCTTTGGTTGATTCAAGTTATTCCTTGTGTGATTTTGAGGCAATCTTCAATTTTGGTGATTCGAATTCAGATACGGGTGGGTTTCATACAAGCTTTCCTGCACAGCCTGCTCCCTATGGAATGACTTACTTCAAAAAACCAGTGGGGCGTGCTTCTGATGGAAGGCTTATTGTTGATTTTCTCGCTCAGGGTCTTGGATTGCCATATTTGAGCCCATATCTGCAATCAATTGGATCAGACTATACTCATGGGGCTAACTTTGCGTCTTCAGCCTCCACTGTGATTCCGCCCACAACTTCCTTCTCTGTCAGTGGGCTAAGTCCATTTTCCCTCTCTGTTCAACTCAGGCAAATGGAGCAATTCAAAGCCAAAGTTGATGAATTTCATCAAACAGGAACAAGGATATCATCTGGAACGAAAATCCCTTCTCCAGATATATTTGGAAAGGCCCTTTACACGTTCTATATTGGGCAAAATGACTTCACTTCCAAAATAGCAGCCACTGGTAGTATTGATGGAGTGAGGGGCAGCCTTCCTCACATCGTTTCACAAATCAATGCTGCTATCAAGGAGCTATATGCACAAGGGGGGCGTGCATTTATGGTATTCAATCTTGGTCCTGTGGGATGCTATCCTGGATACTTGGTGGAGCTTCCTCATGCTACTCCCGACTATGATGAGTTTGGATGCATTGTTTCTCACAACAATGCTGTAAATGATTATAACAAACTGTTGAGGGATACATTGACTCAAACCGGAGAAAGTTTAGTAGATGCTTCCCTTATTTATGCGGACACACACTCTGCTCTCTTGGAGCTCTTTCACCACCCCACATTCTATGGACTAAAGTATAATACCAGAACATGTTGTGGGTATGGAGGCGGTGTCTACAACTTTAACCCTAAAATTTTGTGCGGCCATATGCTAGCAAGTGCTTGTGATGAACCCCAGAACTATGTGAGCTGGGATGGCATCCATTTCACAGAAGCAGCAAACAAGATTGTTGCACATGCCATTCTAAATGGTTCTCTTTTTTATCCTCCTTTCCCTCTTCATAAACACTGTGATCTCCAACCTATTGGTTGA 1167 0.4267 MMGTLKVSNSSLYIFSKFLVICMVMMISLVDSSYSLCDFEAIFNFGDSNSDTGGFHTSFPAQPAPYGMTYFKKPVGRASDGRLIVDFLAQGLGLPYLSPYLQSIGSDYTHGANFASSASTVIPPTTSFSVSGLSPFSLSVQLRQMEQFKAKVDEFHQTGTRISSGTKIPSPDIFGKALYTFYIGQNDFTSKIAATGSIDGVRGSLPHIVSQINAAIKELYAQGGRAFMVFNLGPVGCYPGYLVELPHATPDYDEFGCIVSHNNAVNDYNKLLRDTLTQTGESLVDASLIYADTHSALLELFHHPTFYGLKYNTRTCCGYGGGVYNFNPKILCGHMLASACDEPQNYVSWDGIHFTEAANKIVAHAILNGSLFYPPFPLHKHCDLQPIG* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0239 388 Gene3D SGNH hydrolase 31 370 IPR036514 -
Gso16g0239 388 SUPERFAMILY SGNH hydrolase 42 368 - -
Gso16g0239 388 Pfam GDSL-like Lipase/Acylhydrolase 42 366 IPR001087 GO:0016788
Gso16g0239 388 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 7 386 - -
Gso16g0239 388 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 7 386 - -
Gso16g0239 388 CDD SGNH_plant_lipase_like 41 370 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0239 Gso-Chr16 2770978 2773844 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0239 41 369 Acyl Lipid Metabolism Gene Families AT4G10950 28.947 1.06e-30 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0239 - - gmx:100814956 797.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0536 7 5432555 5435345 Gso16g0239 16 2770978 2773844 GST