Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0237 ATGGCAACATCTCTTCTGAAAACTCCGCTCAATGTGTTCAACAGACACCACAATCACGTCGCATTCTTCTCCAATGGCACAAGTGCAAGAAGCAGTGCTCCAATTTCGCAGAAGAGGAGATCGCGTCCATTCCCCGTAGTGTCAATGGCATCCACACCGGTTCAAACTTCTCTCGAAAAAACTGAACTTTCGTCCAAAAGCACCGGTCTTCCAATAATGGTTAATGCATGTACTGGAAAAATGGGAAAGGCTGTGATTAATGCGGCGGAAGCTGCTGGACTGAATGTTGTTCCTGTGTCGTTTGGCTGTGAAGAGGAGTCTGGACAGACTTTTCAGATTGGTGGAAAGGAGTTTCTAGTGCATGGTCCTTCTGACAGGGAGAGTGTTCTTGCATCTGTGCTTGATAAGTATCCAAATTTGATTGTTGTGGATTACACAATACCCGATGCAGTCAATGGCAATGCTGAGTTATACAGTAAGGTTGGGGTGCCCTTCGTGATGGGAACCACTGGTGGAGATAGGGACTTGTTGCATAAGACCGTGTTAGATTCAAACATTTATGCTGTGATATCCCCACAAATGGGAAAGCAGGTTGTTGCTTTTCTTGCAGCTATGGAAATTATGGCAGAGCAATTTCCTGGAGCCTTCTCTGGGTATTCCTTACAGGTATTGGAGTCCCATCAAGCAAGCAAAGTTGATGCATCTGGAACTGCAAAGGCTGTAATTTCTTGCTTCAACAAACTGGGGGTGTCTTACGATATGGATCAGATAAAATTGATCAGGGATCCCCGGCAACAACTTGAAATGGTTGGAGTCCCAGAGGAGCATCTATCTGGTCATGCGTTTCATATGTATCATTTGACATCCCCAGATGACACAGTTACATTCGAATTTCAACATAATGTTTGTGGTAGATCAATATATGCGGAGGGCACTGTTGATGCTGTGCTGTTTCTTGCTAAGAAGATTGAAACAAAGGATCCCAAGAGACTGTATAATATGATTGATGTCTTGCGAGAGGGTAATATGCGATGA 1035 0.4425 MATSLLKTPLNVFNRHHNHVAFFSNGTSARSSAPISQKRRSRPFPVVSMASTPVQTSLEKTELSSKSTGLPIMVNACTGKMGKAVINAAEAAGLNVVPVSFGCEEESGQTFQIGGKEFLVHGPSDRESVLASVLDKYPNLIVVDYTIPDAVNGNAELYSKVGVPFVMGTTGGDRDLLHKTVLDSNIYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLQVLESHQASKVDASGTAKAVISCFNKLGVSYDMDQIKLIRDPRQQLEMVGVPEEHLSGHAFHMYHLTSPDDTVTFEFQHNVCGRSIYAEGTVDAVLFLAKKIETKDPKRLYNMIDVLREGNMR* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0237 344 PANTHER DIHYDRODIPICOLINATE REDUCTASE 38 344 IPR023940 GO:0008839|GO:0009089
Gso16g0237 344 PANTHER 4-HYDROXY-TETRAHYDRODIPICOLINATE REDUCTASE 1, CHLOROPLASTIC-RELATED 38 344 - -
Gso16g0237 344 Pfam Dihydrodipicolinate reductase, C-terminus 198 338 IPR022663 GO:0008839|GO:0009089
Gso16g0237 344 Gene3D Dihydrodipicolinate Reductase; domain 2 196 303 - -
Gso16g0237 344 Pfam Dihydrodipicolinate reductase, N-terminus 71 194 IPR000846 GO:0008839|GO:0009089
Gso16g0237 344 Gene3D - 72 338 - -
Gso16g0237 344 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 70 338 IPR036291 -
Gso16g0237 344 TIGRFAM dapB_plant: dihydrodipicolinate reductase 72 344 IPR011859 GO:0008839|GO:0009089|GO:0070402
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0237 Gso-Chr16 2748257 2751979 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0237 K00215 - gmx:100807997 680.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0534 7 5405939 5409435 Gso16g0237 16 2748257 2751979 GST