Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0232 ATGCCTCCATTGACTTCGTGGCTGGTGCTGCCCATTCTCGTGTTGTTGGCGGCTCCGGCAACAACCCCTCCAGCACGTGCCTCACCGGTCGCGTCGTCCTTCGACGGTCAACGGGAGTTTGACTATTTCAAGTTAGCGTTGCAATGGCCCGGCACTTACTGCAAACGCACCCGCAGTTGCTGCCCCACCAATGGTTGCTGCAGAGGCTCCAATTCTCCAGCAGTATTCACCATACATGGACTCTGGCCTGACTATAATGATGGAAGCTGGCCGTCCTGTTGCTCTGGATCTAGTTTTGATCCAAAAGAGATATCAACATTGACTAATGCTTTAGAGCAATATTGGCCATCATTGAGCTGTAGCAAGCCATCATTATGCCATGGTGGGAAAGGAACATTTTGGGCTCATGAGTGGGAGAAACATGGCACATGCTCTTATCCTGTGTTTCGAAATGAATATGATTATTTTCTGACAGTTCTGAATGTCTATTTCAAATATAATATTACGAGCGTTCTAAATGATGCTGGATATGTTCCCTCTAATACAGAAAAGTATCCCCTTGGAGGCATCATCTCTGCCATTGAGAATGCTTTTCATGCATCTCCTCAAATAGTTTGCTCAAAAGATTCCATTGAGGAACTTTACCTATGCTTTTATAAGAACTTCCAGCCACGAGATTGTGCTCTTGGATCTGACATTAAAATCGACATGGTTACTTCAAAAAAATCTTGTCCCAAATATGTTAGCTTGCCAGAATCTGTATCAGTGGGGTACAATGGACTTCAAAGTCGGGTCTCTGATGATGTAGCTCTTTAA 816 0.4473 MPPLTSWLVLPILVLLAAPATTPPARASPVASSFDGQREFDYFKLALQWPGTYCKRTRSCCPTNGCCRGSNSPAVFTIHGLWPDYNDGSWPSCCSGSSFDPKEISTLTNALEQYWPSLSCSKPSLCHGGKGTFWAHEWEKHGTCSYPVFRNEYDYFLTVLNVYFKYNITSVLNDAGYVPSNTEKYPLGGIISAIENAFHASPQIVCSKDSIEELYLCFYKNFQPRDCALGSDIKIDMVTSKKSCPKYVSLPESVSVGYNGLQSRVSDDVAL* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0232 271 Gene3D - 36 254 IPR036430 GO:0003723|GO:0033897
Gso16g0232 271 Pfam Ribonuclease T2 family 40 227 IPR001568 GO:0003723|GO:0033897
Gso16g0232 271 SUPERFAMILY Ribonuclease Rh-like 39 250 IPR036430 GO:0003723|GO:0033897
Gso16g0232 271 PANTHER RIBONUCLEASE 2-LIKE ISOFORM X1 36 256 - -
Gso16g0232 271 CDD RNase_T2_euk 40 246 IPR033697 -
Gso16g0232 271 ProSitePatterns Ribonuclease T2 family histidine active site 1. 76 83 IPR018188 GO:0003723|GO:0033897
Gso16g0232 271 ProSitePatterns Ribonuclease T2 family histidine active site 2. 133 144 IPR033130 -
Gso16g0232 271 PANTHER RIBONUCLEASE T2 36 256 IPR001568 GO:0003723|GO:0033897
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0232 Gso-Chr16 2714992 2723944 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0232 K01166 - gmx:100789614 535.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0526 7 5345057 5351913 Gso16g0232 16 2714992 2723944 GST