Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0231 ATGTTAGAGAGACAAATGAAGCCATCTCCAAGACTTCTCTTGATACTCACTTTTCTTGGTTCATTCTTCCTTGCAAGCCCAGAAGCATACTCGTGCACCAGCAACCTAAGCCTCAATGTTTCAATCCCTTTTGATACAACAAACCTTCACTGCCTTTCTGTATGGGATGCTCAAAGTTTCATCCTCAGATATGTTCAGACTTCTGCAAGCACTTGGAGCTTCATTCTCTCAACCCCGGACACAAATTCTTACATAGCTATTGGATTCTCGGCCGGCGGCGGCATGGTGGGTTCAAGTGCCATGGTGGGGTGGGTAGCATCAAGAGGAGCCAGTGGAGGGATTAAGCAGTATTATCTTGGTGGGGTCACACCAAATCAGGTGGTTCCTGATAAGGGCAACCTACAGGTTATAGACAATTCAACCTTCATCACTTTACAATCCTCTCGTTTGTTCATGGTGTTTCAGTTAGAAACTACCGAACCTTTGTCCTCTCTGATATTTGCCACTGGATCCACCGGCTTGTTCCCTGCACCACCAAGTTTTGCACTAACAAAACACCTAGACAAGGTGTCCACAAGAATAGACTATTCAAAAGCCAACATTGGAAGTTCACAAGGGGATGGAAATTCTTCACAAGTAAATGGAAGTACTTCACAATCAGCAGACTCTTGCGGCTCCAATCTAAACCTCAGTGTTCCTCTCCTCTTCGACACAACCAACCTCAATTGTCTTCCTGTTTGGAATGCTCAAGGATACATCCTTAGATATTCTCAGACATCTCAAAACATATGGAGCTTCATTCTCTCAGCACCAAACCCAAATTCATACATAGCAATTGGGTTCTCTCCCAATGGAGGCATGGTGGGTTCAAGTGCCATAGTGGGGTGGATCTCATCAAATGGGGCAAGTGGAGGCATGAAACAGTACTATCTAACAGGTCTCACACCAAACCAAGTGGTGCCAGATAGAGGCAACTTAAAAGTTCTCACCAACTCAACCTTCATCACATCACAGTCCTCACGTTTGTACATGGCATTCCAGTTAGAGACTACCCAACCTCTTTCCAAGTTGATTTATGCCTTTGGACCTAACGGTGTGTTCCCTTCGGCACCAAGTTTTGCATTAGCGCAGCACCAAGACAAAGTCTCCATCACGTTGAATTACGCAACAGGTTCAAGTGCAACAACAGGAAAGTCATATAACCTGAAAAGAAGCCATGGATTGTTGAATATCTTAGGATGGGGCATCCTAATCATAATGGGAGCAATAGTTGCTCGCTACTTCAAGGAATGGGATCCATTTTGGTTTTATTTCCACGCTTCAGTTCAGTCTTTGGGTTTTGTTCTGGGAATAGTTGGTGTAATTAGTGGGTTTGTCTTGAATAATCAACTTCATACCGACGTTAGTCTTCACAAGGCTCTTGGAATCATCATTTTCGTTCTAGGTTGCCTCCAGATAATGGCTTTGCTTGGTCGACCGAAGAAGGAATCAAAAGTGAGAAAGTATTGGAATGCATACCATCACAACATGGGGAGAATTTTGATCATACTAGCCATAGCTAACATTTTCTACGGAATCAAATTAGGTAAGGAGGGAAGTGGATGGAACATCGGTTATGGAATTGTGCTTGCCGTATTATTCACTATGGCAATTACTTTTGAGACTCAATTGTGCAGTAGAGACGATTAA 1689 0.4352 MLERQMKPSPRLLLILTFLGSFFLASPEAYSCTSNLSLNVSIPFDTTNLHCLSVWDAQSFILRYVQTSASTWSFILSTPDTNSYIAIGFSAGGGMVGSSAMVGWVASRGASGGIKQYYLGGVTPNQVVPDKGNLQVIDNSTFITLQSSRLFMVFQLETTEPLSSLIFATGSTGLFPAPPSFALTKHLDKVSTRIDYSKANIGSSQGDGNSSQVNGSTSQSADSCGSNLNLSVPLLFDTTNLNCLPVWNAQGYILRYSQTSQNIWSFILSAPNPNSYIAIGFSPNGGMVGSSAIVGWISSNGASGGMKQYYLTGLTPNQVVPDRGNLKVLTNSTFITSQSSRLYMAFQLETTQPLSKLIYAFGPNGVFPSAPSFALAQHQDKVSITLNYATGSSATTGKSYNLKRSHGLLNILGWGILIIMGAIVARYFKEWDPFWFYFHASVQSLGFVLGIVGVISGFVLNNQLHTDVSLHKALGIIIFVLGCLQIMALLGRPKKESKVRKYWNAYHHNMGRILIILAIANIFYGIKLGKEGSGWNIGYGIVLAVLFTMAITFETQLCSRDD* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0231 562 Gene3D - 381 558 - -
Gso16g0231 562 PANTHER BNAC01G39800D PROTEIN 23 203 - -
Gso16g0231 562 PANTHER BNAC01G39800D PROTEIN 216 560 - -
Gso16g0231 562 SMART 561_7 405 526 IPR006593 -
Gso16g0231 562 ProSiteProfiles DOMON domain profile. 250 362 IPR005018 -
Gso16g0231 562 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 23 203 - -
Gso16g0231 562 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 216 560 - -
Gso16g0231 562 SMART DOMON_3 84 170 IPR005018 -
Gso16g0231 562 SMART DOMON_3 276 362 IPR005018 -
Gso16g0231 562 ProSiteProfiles Cytochrome b561 domain profile. 369 562 IPR006593 -
Gso16g0231 562 CDD Cyt_b561_FRRS1_like 383 554 - -
Gso16g0231 562 Pfam Eukaryotic cytochrome b561 406 526 IPR006593 -
Gso16g0231 562 CDD DOMON_DOH 50 186 IPR045266 -
Gso16g0231 562 CDD DOMON_DOH 250 383 IPR045266 -
Gso16g0231 562 ProSiteProfiles DOMON domain profile. 58 170 IPR005018 -
Gso16g0231 562 SUPERFAMILY CBD9-like 264 394 - -
Gso16g0231 562 Pfam DOMON domain 254 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0231 Gso-Chr16 2706873 2714843 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0231 - - gmx:100804791 1100.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0525 7 5336347 5344913 Gso16g0231 16 2706873 2714843 GST