Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0228 ATGCCGACGGGGTTACCGGCGGCGAATTCCTTAGTGGCGCCGGACGAAGAGGGGTGGGTGTGGGGGCAGATCAAGGCGGAGGCGCGCCGCGACGCCGAGTCGGAGCCTGCTTTGGCGAGCTACCTCTACTCGACGATCCTCTCGCACTCGTCGCTCGAGCGTTCTCTGTCTTTTCACCTCGGAAATAAGCTCTGTTCCTCCACGCTTCTCTCGACGCTCCTTTACGACCTGTTCCTCAACGCCTTCTCCTCCGACCCCTCCCTCCGCTCCGCCGCCGTCGCCGATCTCCGCGCTGCCCGCGAACGCGACCCCGCCTGCGTCTCCTACTCCCACTGCCTCCTCAATTACAAAGGCTTCCTCGCTTGCCAGGCGCACCGTGTGGCGCATCTGTTGTGGCGGCAATCACGGCGGCCATTGGCTTTAGCGCTGCACTCTCGCATCGCAGATGTGTTTGCGGTGGACATTCACCCGGCGGCAAGGATTGGGAAGGGGATTCTGTTCGACCATGCCACTGGGGTGGTGGTAGGGGAGACAGCGGTAATCGGGAACAATGTGTCGATCCTGCACCATGTTACTCTGGGTGGGACTGGCAAGGTTGGTGGAGACCGGCATCCTAAGATTGGGGATGGGGTGCTTATTGGTGCTGGTGCTACCATTCTGGGGAATATTAAGATTGGGGAAGGTGCAAAGGTTGGTGCTGGTTCGGTGGTTTTAATTGATGTGCCACCACGGACAACAGCAGTTGGGAACCCGGCGAGGTTGGTTGGTGGGAAGGAGAAGCCCTCTAAGCATGAGGATGTGCCTGGGGAGTCTATGGACCATACTTCCTTTATCTCTGAGTGGTCAGATTATATCATTTGA 861 0.5877 MPTGLPAANSLVAPDEEGWVWGQIKAEARRDAESEPALASYLYSTILSHSSLERSLSFHLGNKLCSSTLLSTLLYDLFLNAFSSDPSLRSAAVADLRAARERDPACVSYSHCLLNYKGFLACQAHRVAHLLWRQSRRPLALALHSRIADVFAVDIHPAARIGKGILFDHATGVVVGETAVIGNNVSILHHVTLGGTGKVGGDRHPKIGDGVLIGAGATILGNIKIGEGAKVGAGSVVLIDVPPRTTAVGNPARLVGGKEKPSKHEDVPGESMDHTSFISEWSDYII* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0228 286 Pfam Serine acetyltransferase, N-terminal 20 124 IPR010493 GO:0005737|GO:0006535|GO:0009001
Gso16g0228 286 SMART SATase_N_2_a 20 124 IPR010493 GO:0005737|GO:0006535|GO:0009001
Gso16g0228 286 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 213 241 IPR018357 GO:0016740
Gso16g0228 286 TIGRFAM cysE: serine O-acetyltransferase 94 253 IPR005881 GO:0005737|GO:0006535|GO:0009001
Gso16g0228 286 Pfam Hexapeptide repeat of succinyl-transferase 171 187 IPR001451 -
Gso16g0228 286 MobiDBLite consensus disorder prediction 250 273 - -
Gso16g0228 286 CDD LbH_SAT 151 251 IPR045304 -
Gso16g0228 286 Gene3D serine acetyltransferase, domain 1 1 153 IPR042122 -
Gso16g0228 286 PANTHER SERINE ACETYLTRANSFERASE 14 286 - -
Gso16g0228 286 SUPERFAMILY Trimeric LpxA-like enzymes 20 256 IPR011004 -
Gso16g0228 286 Pfam Bacterial transferase hexapeptide (six repeats) 204 237 IPR001451 -
Gso16g0228 286 Gene3D Hexapeptide repeat proteins 154 275 - -
Gso16g0228 286 MobiDBLite consensus disorder prediction 257 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0228 Gso-Chr16 2690541 2692284 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0228 20 274 Miscellaneous Gene Families AT2G17640 56.863 2.59e-91 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0228 K00640 - gmx:547632 566.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0522 7 5314151 5315800 Gso16g0228 16 2690541 2692284 GST