Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0143 ATGGCCACCACAAAGCCATTGTTAACCGACTTAGCCTCCACCGTTGATCGTGTTCCCTCTAACTTCATCAGGCCCATTGGTGACCGTCCAAACCTTCAGCAACTTCACTCCTCCATTGCTTCTATTCCCATCATCGACCTTCAAGGCCTTGGTGGCTCCAATCATTCCCAAATCATCCAAAACATTGCACATGCTTGCCAAAATTATGGCTTCTTTCAAATTGTGAACCATGGGATTCCGGAGGAGGTGGTGAGCAAGATGGTGAATGTGTCAAAAGAGTTCTTTGGTTTGCCGGAGAGTGAGAGGCTGAAGAATTACTCTGATGACCCAACCAAGACCACAAGACTCTCCACCAGTTTCAATGTCAAGACTGAGAAAGTTTCCAACTGGAGAGACTTCTTGAGACTTCACTGCCACCCCCTTGAGGATTACATTCAAGAATGGCCTGGCAACCCTCCATCTTTCAGGGAAGATGTGGCGGAGTATAGTAGAAAGATGAGGGGTTTATCACTGAAGTTGCTTGAGGCTATCTCAGAGAGTTTGGGGTTGGAAAAGGATTATATAGACAAAGCATTGGGGAAACATGGGCAGCACATGGCCATAAACTACTACCCTCCATGTCCTGAGCCAGAGTTAACATATGGTTTGCCAGCTCATGCTGACCCAAATGCAATTACTATTCTGCTCCAAAATCAAGTCCCTGGCTTGCAAGTCCTCCATGATGGCAAGTGGCTAACCGTCAATCCTGTTCCTAACACCTTCATTGTCAATATTGCTGACCAAATTCAGGTGATAAGCAACGATAGGTACAAGAGTGTGCTGCATCGAGCATTGGTGAATTGTGAGAAGGAGAGAATGTCCATTCCAACATTCTATTGCCCTTCACCTGATGCATTGATAAAACCAGCACCACAACTCGTAGACAAGGAACATCCTGCGCAGTACACAAACTTCACATACAGAGAATACTACGACAAGTTCTGGATCAGAGGACTTTCAAAAGAAACATGCGTGGACATGTTCAAGGCTCAAGATTAA 1038 0.4557 MATTKPLLTDLASTVDRVPSNFIRPIGDRPNLQQLHSSIASIPIIDLQGLGGSNHSQIIQNIAHACQNYGFFQIVNHGIPEEVVSKMVNVSKEFFGLPESERLKNYSDDPTKTTRLSTSFNVKTEKVSNWRDFLRLHCHPLEDYIQEWPGNPPSFREDVAEYSRKMRGLSLKLLEAISESLGLEKDYIDKALGKHGQHMAINYYPPCPEPELTYGLPAHADPNAITILLQNQVPGLQVLHDGKWLTVNPVPNTFIVNIADQIQVISNDRYKSVLHRALVNCEKERMSIPTFYCPSPDALIKPAPQLVDKEHPAQYTNFTYREYYDKFWIRGLSKETCVDMFKAQD* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0143 345 PRINTS Isopenicillin N synthase signature 62 79 - -
Gso16g0143 345 PRINTS Isopenicillin N synthase signature 219 240 - -
Gso16g0143 345 PRINTS Isopenicillin N synthase signature 254 280 - -
Gso16g0143 345 SUPERFAMILY Clavaminate synthase-like 12 330 - -
Gso16g0143 345 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 194 294 IPR005123 -
Gso16g0143 345 PANTHER PROTEIN DMR6-LIKE OXYGENASE 2-LIKE 3 336 - -
Gso16g0143 345 Pfam non-haem dioxygenase in morphine synthesis N-terminal 42 149 IPR026992 -
Gso16g0143 345 Gene3D - 8 330 IPR027443 -
Gso16g0143 345 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 3 336 - -
Gso16g0143 345 Pfam 2OG-Fe(II) oxygenase superfamily 197 294 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0143 Gso-Chr16 1549171 1551901 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0143 11 342 Glycosyltransferase AT5G59530 31.471 2.16e-55 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0143 K24028 - gmx:100788012 714.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0435 7 4202641 4206273 Gso16g0143 16 1549171 1551901 GST