Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0134 ATGGGGGGAAAGAGGAGGAAGAGCGATGATGATGATGACGTGGAAGCTGAGGCTTCAGCTTCAGGTTGGAAGAAGAAAACGAGAACGACGGAGAAGGAGGAGAAGGAGAAGAAGGAGCCATTGCGTCCTTCGATGATAAAGAACAAGGAGAAGCGATCGGAGCTGCACGCCAAGCTGAAGCAGCAGAAGAAGCTCGACAAGCGCGCCAAGGCCAAGGCTCGAGACGCTGCTCTCAAGAGAGCTCTCGACCTCGGCGAGGAGCCTCCGGAGAAGAAGGTTCCTCGCACCATCGAGAACACGAGGGAACTCGACGAGACCGTTTGCAAGCCCGACGATGATGAGTTATTTGCTGGAAATGATGCTGATGAATTCGGTTCAATTTTGAATCAACAACAAACTCCCAAGATATTAATCACCACTTGCCGCTTCCATTCTACTAGGGGACCTGCCTTTATATCGGAGTTGCTTTCAGTTATACCAAATGCACATTACTTCAAGAGAGGAACATATGATCTGAAAAAGATTGTAGAATATGCAAAGAAGAAGGACTTCACCTCTGTTATAGTTGTTCACACCAATCGTAGGGAACCAGATGCTCTTTTAATTATTGGTGTACCCGATGGGCCGACTGCTCATTTCAAGCTCTCAAAGCTTGTTTTGCGCAAGGATATCAAGAATCATGGAAATCCAACCGGTCACAAGCCTGAGCTTGTATTGAATAACTTCACAACACGTCTAGGGCATCGAGTTGGAAGGTTGATACAGTCACTTTTTCCACAAGATCCAGAATTTAAAGGCCGGCGAGTAGTCACTTTCCACAACCAGAGAGACTTCATATTCTTCCGGCATCATCGGTACATTTTTGAAACCAAAGAAGTTAAAAAAACAGAGTCTAAAGGTAAAAAGGACAAAGAAGGCAAGAGTGAGAATGTTCCCGAACAGAAAACAATTGCCCGACTTCAGGAATGTGGCCCTCGTTTCACATTAAAGTTGATTAGCCTGCAGCATGGAACATTTGACACTAAGGGTGGGGAATATGAGTGGGTTCACAAGCCGGAAATGGACACAAGCCGAAGGAGGTTCTTCCTATGA 1092 0.4615 MGGKRRKSDDDDDVEAEASASGWKKKTRTTEKEEKEKKEPLRPSMIKNKEKRSELHAKLKQQKKLDKRAKAKARDAALKRALDLGEEPPEKKVPRTIENTRELDETVCKPDDDELFAGNDADEFGSILNQQQTPKILITTCRFHSTRGPAFISELLSVIPNAHYFKRGTYDLKKIVEYAKKKDFTSVIVVHTNRREPDALLIIGVPDGPTAHFKLSKLVLRKDIKNHGNPTGHKPELVLNNFTTRLGHRVGRLIQSLFPQDPEFKGRRVVTFHNQRDFIFFRHHRYIFETKEVKKTESKGKKDKEGKSENVPEQKTIARLQECGPRFTLKLISLQHGTFDTKGGEYEWVHKPEMDTSRRRFFL* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0134 363 MobiDBLite consensus disorder prediction 1 72 - -
Gso16g0134 363 PANTHER U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4 34 363 IPR044281 GO:0006364|GO:0042134
Gso16g0134 363 SUPERFAMILY Class II aaRS ABD-related 134 337 - -
Gso16g0134 363 Gene3D - 134 330 - -
Gso16g0134 363 MobiDBLite consensus disorder prediction 293 312 - -
Gso16g0134 363 ProSiteProfiles Brix domain profile. 134 340 IPR007109 GO:0006364|GO:0019843
Gso16g0134 363 SMART Brix_2 137 334 IPR007109 GO:0006364|GO:0019843
Gso16g0134 363 PANTHER RIBOSOME PRODUCTION FACTOR 1 34 363 - -
Gso16g0134 363 Pfam Brix domain 149 332 IPR007109 GO:0006364|GO:0019843
Gso16g0134 363 MobiDBLite consensus disorder prediction 293 316 - -
Gso16g0134 363 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0134 Gso-Chr16 1412754 1417221 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0134 K14846 - gmx:100791194 632.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0425 7 3993977 3998104 Gso16g0134 16 1412754 1417221 GST