Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0101 ATGAAGTTCACGGTGTCAAATCTACCAAGCTCTATGTTCCTCCTCGTGTTCTTCATAGCTCTTGTCTCTCATACACATGGAAGCAAGATCGACCACCATAGAAGCAACAAACATGTTCCCCTCTTCATTTTTGGCGATTCTTTCTTAGATGCTGGCAACAACAACTACATCAACACAACAACCCTTGATCAAGCAAATTTCTTGCCATATGGAGAAACATACTTCAAGTTCCCAACGGGGAGATTCTCTGATGGACGGTTAATATCAGATTTCATAGCTGAATACGCAAACCTTCCATTGGTTCCACCATATTTACAACCTGGCAATAGCAATTACTACGGTGGAGTGAATTTTGCATCTGGTGGAGCTGGTGCTCTTGTTGAAACTTTTCAAGGGTCGGTAATACCCTTCAAAACACAAGCAAGAAACTACGAGAAAGTAGGAGCTTTGTTGAGGCACAAGTTAGGCAGTTCTGAAGCTAAATTATTGTTATCAAGCGCTGTCTATATGTTTAGCATCGGATCCAATGATTACCTTAGCCCATTCTTGACACATTCTGATGTTCTTAACTCTTACTCTCATTCAGAATATGTTGGTATGGTTGTTGCTAACATGACTTCCATTATCAAGGAAATATACAAGAGAGGGGCTAGAAAATTTGTGTTCATGACCTTGCCACCATTGGGTTGTCTTCCAGGCACTAGAATAATTCAATTACAAGGAAATGGTAAATGCTTACAAGAACTTTCAGCCCTTGCAAGTTTACACAATGGAGTTCTAAAAGTTGTTCTCTTACAACTGGATAAGCAATTAAAGGGCTTTAAATTTGCTCTATATGATTTCAGTGCTGACCTCACTCAAATGATAAACCATCCCTTGAAATATGGTTTGAAGGAAGGAAAATCAGCATGTTGTGGAAGTGGACCATTTAGAGGAGTGTATAGCTGCGGAGGGAAAAGAGGGGAGAAGCAATTTGAATTATGTGACAAACCCAATGAATATTTATTTTGGGACTCTTATCATCTTACAGAAAGTGCTTACAAAAAATTTGCAGATCGTATGTGGGGCTTCCCAAACAACTCTTCCAATATAGGGTATTACACTATTAGAGATCTCTTCCAACTCCCATGA 1131 0.3943 MKFTVSNLPSSMFLLVFFIALVSHTHGSKIDHHRSNKHVPLFIFGDSFLDAGNNNYINTTTLDQANFLPYGETYFKFPTGRFSDGRLISDFIAEYANLPLVPPYLQPGNSNYYGGVNFASGGAGALVETFQGSVIPFKTQARNYEKVGALLRHKLGSSEAKLLLSSAVYMFSIGSNDYLSPFLTHSDVLNSYSHSEYVGMVVANMTSIIKEIYKRGARKFVFMTLPPLGCLPGTRIIQLQGNGKCLQELSALASLHNGVLKVVLLQLDKQLKGFKFALYDFSADLTQMINHPLKYGLKEGKSACCGSGPFRGVYSCGGKRGEKQFELCDKPNEYLFWDSYHLTESAYKKFADRMWGFPNNSSNIGYYTIRDLFQLP* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0101 376 CDD SGNH_plant_lipase_like 41 355 IPR035669 -
Gso16g0101 376 Gene3D SGNH hydrolase 30 364 IPR036514 -
Gso16g0101 376 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 11 374 IPR044552 -
Gso16g0101 376 SUPERFAMILY SGNH hydrolase 41 357 - -
Gso16g0101 376 Pfam GDSL-like Lipase/Acylhydrolase 41 353 IPR001087 GO:0016788
Gso16g0101 376 PANTHER GDSL ESTERASE/LIPASE 5 11 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0101 Gso-Chr16 1083378 1088047 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0101 41 355 Acyl Lipid Metabolism Gene Families AT4G10950 31.464 1.42e-50 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0101 - - gmx:100819379 763.837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0390 7 3676848 3682337 Gso16g0101 16 1083378 1088047 GST