Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0096 ATGAGCAGAGTTGGTGCTGATGTTTTGAACGTGGACTTGGCTGCTGCAGTGAACAACCTCTTCAATCTTCCTGAAACCATGCAGAAGTTCATTTTTCCTTCTTCTCGTGCTCCTGATCAACATGAGACCAGAGGGATTTCTAGCATCATTCCAGTGGACATTTTGGACACTTCCAAGGAGTATATATTCTTCATGGATGTTCCTGGTCTCTCCAAGTCTGAAATTCAGGTGATCGTTGAAGATGAGAACACACTTGTTATACGAAGCAATGGGAAAAGGAAGCGTCAAGATGGAGAGGATGAAGAGTGCAAGTATCTTAGGTTGGAGAGGAGAGGTCCTCAGAATTTGCTGAGGAAGTTCCGTTTGCCTGAGAATGCTAATGTGTCAGCCATTACAGCTAAATGTGAAAATGGGGTTCTGGCTGTGGTTGTTGAGAAGCACCCTCCTCCACCAAAATCAAAAACTGTTGAAGTTGCCATTGCTTGA 486 0.4424 MSRVGADVLNVDLAAAVNNLFNLPETMQKFIFPSSRAPDQHETRGISSIIPVDILDTSKEYIFFMDVPGLSKSEIQVIVEDENTLVIRSNGKRKRQDGEDEECKYLRLERRGPQNLLRKFRLPENANVSAITAKCENGVLAVVVEKHPPPPKSKTVEVAIA* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0096 161 Gene3D - 10 160 IPR008978 -
Gso16g0096 161 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 43 161 IPR002068 -
Gso16g0096 161 Pfam Hsp20/alpha crystallin family 53 158 IPR002068 -
Gso16g0096 161 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 14 161 - -
Gso16g0096 161 SUPERFAMILY HSP20-like chaperones 27 154 IPR008978 -
Gso16g0096 161 PANTHER 17.4 KDA CLASS III HEAT SHOCK PROTEIN 14 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0096 Gso-Chr16 1036530 1037707 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0096 K13993 - gmx:100799280 302.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0385 7 3616820 3617843 Gso16g0096 16 1036530 1037707 GST