Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0072 ATGAAAAAAAAAAAAAACTCTTGCTTACCACATTTGAGTTTGAGCTTGGTTCTTCAAATGAGATCCCCTTCTGTTGGATTCACCGGAATACTTGTGCTTCTTGTTTTCCTCTCTGCTTGCTGTTGCAGTTCTTCTACACATGGGAGTTTGGAAACGGAGAAAACTTTTGCCATTATAAAACCAGACGGATTGCTTGGTAACTACACAGATGATATCAAGAGAACAATTGTAGAATATGGTTTCAGAATTTTAAAGGAAAAGATTGTTCAACTCGATGAGGGCACTGTGAAAAGTTTTTATGCTGAGCACTCTTCAAAAAGCTTCTTTTCAAGCCTTATAAAATACATGACAAGTGGACCAGTGTTAATTATGGTCTTGGAGAAGGACAATGCTATTGCTGATTGGCGCGCTTTAATGGGTCCTACTGATGCAAGCAAGGCTAAGATTACTCACCCTCACAGTATCAGAGCAAAATGTGGATTGGATATGGAAAAGAATTGTGTTCATGGTTCAGACTCTCCCAAATCTGCGCAAAGAGAGATATCATTTTTCTTTAAAGAGCTCTCTGCAGATGTGGTTGCAGAGCATGATGAATTGTAG 600 0.3883 MKKKKNSCLPHLSLSLVLQMRSPSVGFTGILVLLVFLSACCCSSSTHGSLETEKTFAIIKPDGLLGNYTDDIKRTIVEYGFRILKEKIVQLDEGTVKSFYAEHSSKSFFSSLIKYMTSGPVLIMVLEKDNAIADWRALMGPTDASKAKITHPHSIRAKCGLDMEKNCVHGSDSPKSAQREISFFFKELSADVVAEHDEL* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0072 199 Gene3D - 46 197 IPR036850 -
Gso16g0072 199 PANTHER NUCLEOSIDE DIPHOSPHATE KINASE 37 198 - -
Gso16g0072 199 ProSitePatterns Nucleoside diphosphate kinases active site. 166 174 IPR023005 -
Gso16g0072 199 PRINTS Nucleoside diphosphate kinase signature 55 77 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Gso16g0072 199 PRINTS Nucleoside diphosphate kinase signature 99 118 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Gso16g0072 199 PRINTS Nucleoside diphosphate kinase signature 119 136 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Gso16g0072 199 PRINTS Nucleoside diphosphate kinase signature 166 185 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Gso16g0072 199 Pfam Nucleoside diphosphate kinase 53 187 IPR034907 -
Gso16g0072 199 SUPERFAMILY Nucleoside diphosphate kinase, NDK 52 188 IPR036850 -
Gso16g0072 199 PANTHER NUCLEOSIDE DIPHOSPHATE KINASE 37 198 - -
Gso16g0072 199 SMART ndk_5 52 192 IPR034907 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0072 Gso-Chr16 846054 849340 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0072 K20790 - gmx:100500470 344.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0359 7 3396235 3399553 Gso16g0072 16 846054 849340 GST