Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0053 ATGTCTGCTGAATCGCCAAGTTCTGCTCGTAAAGTGGTTGTTCATCTCAGAGCCACCGGCGATGCTCCTATTCTCAAGCAATCCAAATTCAAGATAGCAGGAACTGATAAATTCGCTAAAGTGATAGACTTTCTTCGCCGACAGCTCCACAGGGAAACATTGTTTGTATACATCAATAGTGCTTTTTCACCAAACCCTGATGAATTGGTCATTGATTTGTTTAATAATTTTGGTTTTGATGGCAAACTGGTGGTCAACTACGCTTGTTCTATGGCATGGGGCTAA 285 0.4175 MSAESPSSARKVVVHLRATGDAPILKQSKFKIAGTDKFAKVIDFLRRQLHRETLFVYINSAFSPNPDELVIDLFNNFGFDGKLVVNYACSMAWG* 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0053 94 PANTHER UBIQUITIN-LIKE PROTEIN ATG12B 1 94 - -
Gso16g0053 94 Pfam Ubiquitin-like autophagy protein Apg12 11 94 IPR007242 GO:0000045|GO:0005737
Gso16g0053 94 SUPERFAMILY Ubiquitin-like 10 93 IPR029071 -
Gso16g0053 94 PANTHER AUTOPHAGY PROTEIN 12 1 94 IPR007242 GO:0000045|GO:0005737
Gso16g0053 94 CDD Ubl_ATG12 11 93 - -
Gso16g0053 94 Gene3D - 5 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0053 Gso-Chr16 612427 615886 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0053 K08336 - gmx:100527733 189.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0334 7 3150950 3153978 Gso16g0053 16 612427 615886 GST