Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0049 ATGGGTTCTCGAGGAAGGCCATTATTTGATCTCAACGAGCCACCTGCCGAGGATAATGATGAGAGGGAAGGTATTGTCTGCTTCCAGCCCCAAAAGACACATCCATCAACAAATCCACACACGTCTGACTTATTTGCAACATCATCTGCTGCCCAAGGAATAATAAATAATCATGCTTTTTCACATGCCTCATCTGTCTCTGGATTTCAACCTTTTGTTCGGCCTAAATCCACTGGTGTCCCTGAATTGGATGCTGAATCCAAGACAGCAGGAGATCAGGATGCAAAAGTTTCCTCTAAAGATGAAGTGAGAGTTATGGATTCACGGATATTAAGTTCGGCAAATGCTCAATCTACAGAGAGGGAAGAGGGGGAATGGTCTGATGAGGAGGGCGGCTTTGCTAATGCAAATGGAGGTAATAATGCTATTGCAAATGGAGGTAATAATGCTATTGCAAATGGAGGTAATAATTTGCCACAACGAAGTCAAGCTTCAGAAGAGCCAGCAACTTCTGGAATGGTGGATGGGGGTGTTGCAGTGGCTTCTGACAGTAAGTCTAGAAATATTAAGAGTTCTGATAGTATAAATGATGAAAAGAGTAGCCATGCTTCTATAGGTCTAGAATCAAACTCTAGTGAACAGAAAAGCAATAGTATTCCAAATTTAGAAAGCAATATAAAAAGTGAAGCTTCTATTGATGCACAGGAGGAACCCCCTTTAATCCCCAAGCCAAAAGAAGTGAAAGGTATTGAAGCAAGTCATGCACTTAGGTGTGCTAATAATCCTGGGAAGAGGAGGATTGACCAACGTAAAGAAGAAATGTTGGGAAAGAAACGTAATAGACAGACTATGTTTCTTAACTTGGAAGATGTGAAGCAAGCAGGTCCTATTAAAACCTCAACCCCTAGAAGGCAGACCTTCTCATCACCTGTCATAAGTCGTACCATAAAGGAAGTCCGCACTGTTCCTGCACAAGTTGAGCGTGTTGGAATAGCTAAGGATCAGAAGCTCACCGACACATCTTCTGCTGAAGGTGGCAATCATGCTGAAGCACAAGAGCCTAAATCTGATTGTAATGGTGATACTTCTGGACCACTAGTTAGATCTAGGAGGTTAAACAGTGAGACAGAACCTCCTACAGAGGGCAATTTACCACCCATTCCAAGACAGGGTTCATGGAAACAACTGTCAGATTCAAGGCAGCAGAAGAATGTATTCCATTCTAATAGGAAGTCGGGACTGAGTGGTCAAAGCTCCAATGATGTCAAATTGGTAAACAAGAAACATCTTTCTATCAAGAAGCAGACACCTATCAGCAGCCAGTCCCAGGACACTTCTGTTGAACGCCTTATACGGGAGGTGACCAGTGAAAAGTTTTGGCATCACCCAGAGGAGACTGAGCTACAGTGTGTTCCTGGACGATTTGAATCAGTAGAAGAGTATGCTAGAGTATTTGAGCCTTTGCTGTTTGAAGAATGCCGTGCTCAACTTTACAGTACCTGGGAAGAATCAACGGAAACAGTTTCAAGGGATACTCATATTATGGTGCGAGTGAAGGCAAATGAGTCAAGAGAAAGAGGTTGGTATGATGTGAAGGTTCTTCCAGTACATGAGTTCAAGTGGTCATTTAAGGAGGGTGATGTTGCAATCCTTTCATCCCCTAGGCCTGGATCAGTTAGATCCAAGCAGAATAGTTCTTCTTTAGCTCAGGATGATGGGGAATCAGAAGTCACTGGGCGTGTGGTTGGTACTGTTAGGCGTCACATACCTATTGATACCCGTGATCCTCCTGGTGCAATTTTACATTACTATGTTGGAGACTCTTATGACCCCAGCAGGGTTGATGATGATCATATCATAAGAAAACTTCAAGCTGGAAGCATCTGGTATCTCACAGTGCTTGGTTCTCTTGCTACCACACAGAGGGAGTATATTGCCCTACATGCATTTCGTCGCTTAAATTTGCAGATGCAAACTGCAATCCTTCAACCTAGTCCTGAACACTTCCCTAAATATGAGCAACAGACCCCAGCCATGCCTGAATGCTTCACACAGAACTTTGTTGAGTATCTGCGTAGGACCTTCAATGAACCCCAGTTGGCAGCAATCCAATGGGCAGCAATGCATACAGCAGCAGGTACTAGTAGTGGAACGACAAAGAGGCAAGAACCTTGGCCATTTACCCTTGTTCAAGGACCTCCAGGAACAGGAAAAACACATACAGTATGGGGAATGTTGAATGTCATTCACCTTGTGCAGTATCAGCACTACTACACCTCTTTACTTAAGCATGTAGCCCCTGAGAGCTACAAGCAAGTCAATGAGATCAATTCAGATAATGCCCCAACTGGATCTATTGATGAAGTTCTTCAAAACATGGACCAGAATCTCTTGCGAACTTTACCTAAATTGGTCCCAAAACCTAGAATGTTAGTTTGTGCTCCTTCTAATGCTGCCACCGATGAGCTTCTTGCCCGTGTTCTTGATCGTGGATTTATTGATGGAGAGATGAAAGTATATCGACCTGATGTGGCTCGAGTTGGGGTTGATTCTCAGACACGTGCTGCCCAAGCAGTTTCAGTTGAGCGTAGAACTGAACAGCTTCTTGTCAAGAGTCGGGAAGAAATTATGGGATGGATGCACCAGTTAAAGAATCGTGAAGCGCAATTGGTTCAGCAGTTGCATGGTCTTCATAGAGAACTAAATGCTACTGCTGCTGCTGTTCGTTCCCAAGGATCTGTTGGTGTTGATCCTGACCTTCTCATGGCCAGAGATCAGAACAGAGATGCTTTGCTACAGAACCTTGCTGCTGTGGTTGAAAACAGGGATAAGGTTTTGGTTGAGATGTCTCGCCTTGCCCTTTTGGAAAGTAGGTTCCGTCCTGGTAGCGGTTTTAATTTGGAAGAGGCCCGTGCTAGTTTGGAGGCCAGTTTTGCAAATGAAGCAGAGATAGTTTTCACTACAGTTTCTAGTAGTGGTCGCAAGTTGTTTTCTCGTCTTTCCCATGGTTTTGATATGGTGGTCATTGATGAGGCAGCCCAAGCCAGTGAGGTGGCAATTCTGCCCCCACTCTCTCTTGGTGCAGCACGATGTGTTCTTGTTGGAGATCCTCAGCAGCTTCCTGCTACAGTTATAAGCAAGGCTGCTGGAACATTGATGTACAGTAGGAGTCTTTTTGAAAGGTTCCAACAAGCAGGATGCCCGACAATGTTGTTGTCTGTGCAGTATAGAATGCACCCCCAGATTCGGGATTTCCCTTCTAGGTACTTCTATCAGGGACGCCTTACTGATAGTGAAAGTGTGGCTAAATTGCCTGATGAGCCATACTACAAGGACCCTTTACTTAGACCATATATATTCTATGACATCAGACATGGGCGCGAGTCTCACAGAGGTGGATCAGTGTCTTATCAAAACATACATGAAGCACAATTTTGTCTCCGACTGTATGAGCATGTTCAGAAAACAGTGAAGTCTTTGGGTTTAGGAAAGATTACTGTTGGCATAATTACTCCTTATAAGCTGCAGTTGAAATGCCTCCAGCGTGAGTTTGACGAAGTCTTAAATTCAGAAGAAGGGAAGGATCTATATATCAACACAGTAGATGCCTTCCAAGGTCAAGAACGGGATGTCATTATAATGTCTTGTGTGCGTGCATCCAGTCATGGTGTTGGCTTTGTTGCAGATATACGTCGAATGAATGTTGCCCTTACGCGTGCGCGAAGGGCCCTTTGGGTCATGGGAAATGCAAATGCTCTGCTGCAATCTGAAGATTGGGCTGCGTTGATTAATGATGCAAAATCTCGGAATTGCTACATGGACATGGACTCTCTTCCTAAGGACTTTCTGGTATCTAAGGCACCTGTTTACACATCATTGCCTGGTAAGCCTTCCTCAAATATGAGGGGCATGAGATCAGGTGGACCAAGATATAGATCAATGGACATGCATATGGAGTCAAGGTTAGGACCACCATCAGAAGATGATGAGAATATGGGTGCTCCAGTTAGCTCCAGAAATGGGAACCATCGTCAATTGCGGTATTCAATGGAGAATTCTTTAGATGATGTTGAGCATGGGGGTGACAAATCAAGAGATGCCTGGCAGTATGGAATACAAAAGAAGCATAACTCATCTGGAACCATGGGAAAGAGAGACGTATAA 4164 0.4416 MGSRGRPLFDLNEPPAEDNDEREGIVCFQPQKTHPSTNPHTSDLFATSSAAQGIINNHAFSHASSVSGFQPFVRPKSTGVPELDAESKTAGDQDAKVSSKDEVRVMDSRILSSANAQSTEREEGEWSDEEGGFANANGGNNAIANGGNNAIANGGNNLPQRSQASEEPATSGMVDGGVAVASDSKSRNIKSSDSINDEKSSHASIGLESNSSEQKSNSIPNLESNIKSEASIDAQEEPPLIPKPKEVKGIEASHALRCANNPGKRRIDQRKEEMLGKKRNRQTMFLNLEDVKQAGPIKTSTPRRQTFSSPVISRTIKEVRTVPAQVERVGIAKDQKLTDTSSAEGGNHAEAQEPKSDCNGDTSGPLVRSRRLNSETEPPTEGNLPPIPRQGSWKQLSDSRQQKNVFHSNRKSGLSGQSSNDVKLVNKKHLSIKKQTPISSQSQDTSVERLIREVTSEKFWHHPEETELQCVPGRFESVEEYARVFEPLLFEECRAQLYSTWEESTETVSRDTHIMVRVKANESRERGWYDVKVLPVHEFKWSFKEGDVAILSSPRPGSVRSKQNSSSLAQDDGESEVTGRVVGTVRRHIPIDTRDPPGAILHYYVGDSYDPSRVDDDHIIRKLQAGSIWYLTVLGSLATTQREYIALHAFRRLNLQMQTAILQPSPEHFPKYEQQTPAMPECFTQNFVEYLRRTFNEPQLAAIQWAAMHTAAGTSSGTTKRQEPWPFTLVQGPPGTGKTHTVWGMLNVIHLVQYQHYYTSLLKHVAPESYKQVNEINSDNAPTGSIDEVLQNMDQNLLRTLPKLVPKPRMLVCAPSNAATDELLARVLDRGFIDGEMKVYRPDVARVGVDSQTRAAQAVSVERRTEQLLVKSREEIMGWMHQLKNREAQLVQQLHGLHRELNATAAAVRSQGSVGVDPDLLMARDQNRDALLQNLAAVVENRDKVLVEMSRLALLESRFRPGSGFNLEEARASLEASFANEAEIVFTTVSSSGRKLFSRLSHGFDMVVIDEAAQASEVAILPPLSLGAARCVLVGDPQQLPATVISKAAGTLMYSRSLFERFQQAGCPTMLLSVQYRMHPQIRDFPSRYFYQGRLTDSESVAKLPDEPYYKDPLLRPYIFYDIRHGRESHRGGSVSYQNIHEAQFCLRLYEHVQKTVKSLGLGKITVGIITPYKLQLKCLQREFDEVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNANALLQSEDWAALINDAKSRNCYMDMDSLPKDFLVSKAPVYTSLPGKPSSNMRGMRSGGPRYRSMDMHMESRLGPPSEDDENMGAPVSSRNGNHRQLRYSMENSLDDVEHGGDKSRDAWQYGIQKKHNSSGTMGKRDV* 1388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0049 1387 MobiDBLite consensus disorder prediction 298 312 - -
Gso16g0049 1387 MobiDBLite consensus disorder prediction 1333 1348 - -
Gso16g0049 1387 MobiDBLite consensus disorder prediction 87 107 - -
Gso16g0049 1387 MobiDBLite consensus disorder prediction 1312 1326 - -
Gso16g0049 1387 MobiDBLite consensus disorder prediction 330 422 - -
Gso16g0049 1387 Gene3D - 630 1075 IPR027417 -
Gso16g0049 1387 MobiDBLite consensus disorder prediction 390 422 - -
Gso16g0049 1387 Coils Coil 880 900 - -
Gso16g0049 1387 MobiDBLite consensus disorder prediction 261 285 - -
Gso16g0049 1387 Pfam AAA domain 1054 1250 IPR041679 -
Gso16g0049 1387 MobiDBLite consensus disorder prediction 1 22 - -
Gso16g0049 1387 Gene3D - 1076 1282 IPR027417 -
Gso16g0049 1387 MobiDBLite consensus disorder prediction 556 573 - -
Gso16g0049 1387 MobiDBLite consensus disorder prediction 77 312 - -
Gso16g0049 1387 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN-RELATED 1 1343 - -
Gso16g0049 1387 CDD SF1_C_Upf1 1078 1267 IPR041679 -
Gso16g0049 1387 CDD DEXXQc_SETX 695 1077 - -
Gso16g0049 1387 PANTHER DNA2/NAM7 HELICASE FAMILY 1 1343 IPR045055 -
Gso16g0049 1387 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 694 1279 IPR027417 -
Gso16g0049 1387 Pfam AAA domain 701 1047 IPR041677 GO:0004386
Gso16g0049 1387 MobiDBLite consensus disorder prediction 198 231 - -
Gso16g0049 1387 MobiDBLite consensus disorder prediction 1349 1370 - -
Gso16g0049 1387 MobiDBLite consensus disorder prediction 356 370 - -
Gso16g0049 1387 MobiDBLite consensus disorder prediction 1294 1387 - -
Gso16g0049 1387 MobiDBLite consensus disorder prediction 554 578 - -
Gso16g0049 1387 MobiDBLite consensus disorder prediction 138 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0049 Gso-Chr16 562565 570862 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0049 - K10706 gmx:100794516 2708.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0328 7 3088945 3097659 Gso16g0049 16 562565 570862 GST