Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0046 ATGGAAACTGTGGTTGGAATTGAGGACAATGACGATGGAAGGTTTGAAGACAGTGGGGTTGATAGAAGCAGTTCGGCTTTGTCTTCACCGAAGCAAATTTCCAACCCAATTGTATACAAGCTTGTTCGGGTTGAAGGTGATGGGAAGTTAGTGCCTGCAACGGATGATGAAGTAATGGAGGTGGGGGATTTTCTTGAGTATGAAAATAGTGAAATGCATGTTGTCACAAACACTGGACAAAGTTTGGAATGCATATCAATTGAAAGATCATCTTCTGGGAAGCTTCGATTGGAGTGTTTGGAAGAGGCAGATTTGGGGAAACTAAATGCAAAATTACAGATTTTGCAAAAGGTCAAAGAAGAGGAGAAACATCGCATATCATGTGGATCACCTGTTCATTCTCATGAAAATATAGATAGCCAGTGTTCAGCTGATAAATTTCCTGTCATGGATGGGAAGGTTCAATCTGAAACTCCCTGCCAGGAAATTCCTTCTATAGCATCAAGTTTTAATTATACTCATAGTAATCAATCTGGGAGTATTGATCAGTGTTCCAGACCTTCAGAAGGAGTAATAGAGAGCGGATCATCTGCTTCTGCTGTCTATTCCAATTTAAAGTCTGATATTTCAATGTCAGATGGAGAAATATGCTTGGACAAGCTATCAATCAGAGAACTGCATGAACTGTTTAAGGTAACGTTTGGTCGGGAAACTACTGTGAAAGACAAACAGTGGCTGAAAAGGAGGATTGCCATGAGTTTAACCAACTCATGTGATGTTTCAGCTACAACTTTCATTATTAAAGATAACAAAATAGTTAGAAAATTTGAAGAAGACAGTTCTGGAAATATGAATGCTGGATCTTTAATCTCTTCGGAAAATATGACTGAAGAAGATGTCAACTTTAAGGATTCATCTGCTGTAGATGCTTGTGGAATTGATGATAACCAAGTTGTTTCTGAAACAAGATCAGAAAATGGATTGGAATATGAGAATTATCAGACAGGACAAAGAGCTGCAAAAAGAATTCGGAGACCTACGAAGAGATATATTGAAGAGCTCTCTGAAAATGAATCTAGAGAGCACAATCCGAGGTTGTCAATTTCTAATAAAACCGTGGGATTTGGACATGTTTCTCCAACTTCGAATGTCAGGCCTGCTAGAAATGCTTTTTCAGAGGCGAGAACATATAGCACCAGGTTAGACTCTCTTGGAGGTTCTAATGTCCAAATTCCTTGTGTGTCTCGGGTTCGGAGAAGTCGTCCAAGAAAAGATATCGCGTCTCTTATGAAATTCCATCCAACTGGAATGGGTGAGGCTGAAAAACTGAGTAATAAGCTCCTTGAGCATAGTTCTGATGCTGGTAGTGACTTTTCAGACAAAGTTTTGAAGTCAAGAATGCCTGCAAAGTTTCATCAACCATCCTCTTCTGAACCTGTGAAAGAGCAGTGTCCAGTAATATGCCCGATTGAGCTACGGCAGGAATTGAGGCCAAAAAGGGCAGATCCATCTGGCCATACTTCAGATGACAATAATATAGTTACTGTTCCCACTGCAAAAGGAGGGATGAGGAGGAAGCATCATCGTGCATGGACTCTTGTTGAGGTGATTAAATTGGTGGAAGGTGTGTCACGGTGTGGAGCAGGGAGGTGGTCTGAAATCAAACGGCTCTCCTTTGCATCATACTCATATCGTACCTCTGTTGATCTTAAGGACAAGTGGAGGAATTTGCTCAAAGCTAGCTTTGCACTGGCACCTGCAGATGAGGGGATAAATTCGCGGAAGCATGGTACGGCTCCCATTCCCGAGAAAATTTTGCTTCGTGTAAGAGAGCTTGCTGAGATGAATTCTCAAGTGCCTCCAAATTATAGCTCAAGCCAGTTAGCTTCTGGTGGAGGGAGTGTGCATGGAGATAGATCAGGGTACTTGTAA 1932 0.4136 METVVGIEDNDDGRFEDSGVDRSSSALSSPKQISNPIVYKLVRVEGDGKLVPATDDEVMEVGDFLEYENSEMHVVTNTGQSLECISIERSSSGKLRLECLEEADLGKLNAKLQILQKVKEEEKHRISCGSPVHSHENIDSQCSADKFPVMDGKVQSETPCQEIPSIASSFNYTHSNQSGSIDQCSRPSEGVIESGSSASAVYSNLKSDISMSDGEICLDKLSIRELHELFKVTFGRETTVKDKQWLKRRIAMSLTNSCDVSATTFIIKDNKIVRKFEEDSSGNMNAGSLISSENMTEEDVNFKDSSAVDACGIDDNQVVSETRSENGLEYENYQTGQRAAKRIRRPTKRYIEELSENESREHNPRLSISNKTVGFGHVSPTSNVRPARNAFSEARTYSTRLDSLGGSNVQIPCVSRVRRSRPRKDIASLMKFHPTGMGEAEKLSNKLLEHSSDAGSDFSDKVLKSRMPAKFHQPSSSEPVKEQCPVICPIELRQELRPKRADPSGHTSDDNNIVTVPTAKGGMRRKHHRAWTLVEVIKLVEGVSRCGAGRWSEIKRLSFASYSYRTSVDLKDKWRNLLKASFALAPADEGINSRKHGTAPIPEKILLRVRELAEMNSQVPPNYSSSQLASGGGSVHGDRSGYL* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0046 643 MobiDBLite consensus disorder prediction 1 30 - -
Gso16g0046 643 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 1 643 - -
Gso16g0046 643 MobiDBLite consensus disorder prediction 618 643 - -
Gso16g0046 643 Pfam Myb-like DNA-binding domain 530 578 IPR001005 -
Gso16g0046 643 CDD SANT_TRF 529 579 - -
Gso16g0046 643 MobiDBLite consensus disorder prediction 498 517 - -
Gso16g0046 643 ProSiteProfiles Myb-like domain profile. 531 578 IPR001005 -
Gso16g0046 643 MobiDBLite consensus disorder prediction 618 633 - -
Gso16g0046 643 SMART sant 527 580 IPR001005 -
Gso16g0046 643 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 523 582 IPR017930 -
Gso16g0046 643 MobiDBLite consensus disorder prediction 366 381 - -
Gso16g0046 643 MobiDBLite consensus disorder prediction 355 381 - -
Gso16g0046 643 SUPERFAMILY Homeodomain-like 525 582 IPR009057 -
Gso16g0046 643 PANTHER TRF-LIKE 3 1 643 - -
Gso16g0046 643 Gene3D - 518 625 - -
Gso16g0046 643 Coils Coil 105 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0046 Gso-Chr16 536591 544743 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0046 - - gmx:100782501 1258.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0325 7 3059701 3067049 Gso16g0046 16 536591 544743 GST