Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0042 ATGGTCCCTGGTTCCAAAACGGAGGGTGGTGGCACTGGTACCACTCACTTGCTCTCTGCAAGAGTGCGCAAAACCATTCAATCCATCAAGGAAATCGTGGGGAACCATTCTGATGCCGATATCTATGTCGCCCTTAAGGAAGCCAACATGGATCCTAACGAAACCACTCAGAAATTGCTCAACCAAGATCCATTTCACGAGGTGAAGAGAAGGAGAGACCGGAAGAAGGAGACTCAGAATGTTGGGAACAGGGGTCAGCCTTCAGCTGACTCACGAAGGCCATCTGAGAATAATAGTGGTCAAGGAATGAAATTTCACACCCATTCTGAACGCAATGTTCGAAGAACAAACTATTCTCGCAGTACTTTTCCTGGCATCAGCAGAGAGTTTCGTGTTGTTAGAGACAACAGAGTAAATCATATATATAAAGAAGTAACGCCTCTTTCACAGCAGCACTCAACATCTGTCACTGAGCAGTTAAATGTAAACATATCTGATAAGGGCTCATCAATTTCCACCAATCATAGGTCATCTGGCTCTAGGAATTCGTCTCAAGCTTCAAATGGTCCTTCTGATTCACATGCTAGATACGCGCCAAAAACCATTGACAGAAAAATTGTATATGAGGATAAGGATAAGCAAGGCATGATTTCAAATGCAGCAGGACGGGTGCAACCAATTAAGCCTAACAGCGTCCATCAAAATTCTGCCTTGGTGGCATCAACCAGTTCTGCTGTTGGGGTGTATTCCTCTTCAACAGATCCAGTTCATGTGCCCTCTCCTGATTCTAGATCACCAGGTGTTGTTGGAGCCATTAGGCGTGAAGTTGGGTTTGTTGGTGTTCGGCGACAGTCTTCAGACAACAAAGCAAAGCAATCATTTGCTCCTAGTAGCCCTCATGTTGTGGGTAAAGATGGTACATCTGCAGATTCTTTTCAATCAGTTGGGGCTGTCTCAAAGACTGAACAATTTAGTCAAACTAATGTAACTGAACCTTCATTATCTGGTATGCCAGTTAGCAGACCGTCGCTGAACAACCAGCATAATAATAGGCCACATCAACAACTTGTGGGACATCAAAGAGTTTCTCAGCAAAATAAAGAATGGAAGCCTAAATCAAGCCAGAAGCCAAACTGTAATAATAGTCCTGGAGTAATAGGAACCCCAAAAAAGGCTGCTGCTGCTGCTTCACCTCCAGCAGAAAATTCTGGAGATATAGAATCAAATACTGTAGAGCTTCAAGATAAACTTTCCCAAGTAAATATATATGAGAACCAAAATGTGATTATAGCACAGCATATTCGAGTTCCAGAGACTGATCGCTGTCGGCTTACATTTGGTACCATTGGGACTGAACTTGATTCTTCAAGGCCTCAATCTAAGTATCACATTATAGGAGCTTCTGAAAAATCAAATGAGGAATTGACTGCAAGCTTGACAGTACCTGCTCCAGAGTTGTCCACTGATGATGTTTCTGGGAGCAAACAGGTGGACTTGCGGGATGAACACATTAGAAGTTTGGGGTCAGACTCTCCAGTATCTGGTGCTACTTCTGAGCAACAATTGCCTGACAACAAAGACTCTTCAAACACTAAGAATCTGGACAATTATGCCAATATTGGATTAGTTCGTGATAGTAGTCCATCCTATGCACCTTCAGAACAGCAGCAACAAGATTCTCATGATATGCCAGGCTTTGCGGCTTACGATTCTCCAGCTGGTTATGACATTCCTTACTTCAGACCCACAATTGATGAAACAGTACGAGGGCAGGGTTTGTCATCTCCTCAGGAGGCTTTGATCTCCCATCCAACCAACACTCCTGCTTCCACAATTGCCATGGTGCAACAACAGCAACCTCCTGTGCCACAGATGTATCCACAAGTTCATGTTTCACACTTCGCTAATCTTATGCCATATCGTCAGTTTCTGTCCCCGGTCTATGTTCCACCCATGGCCATGCCTGGATATTCAAGTAATCCTCCCTATCCTCACCCAACAAATGGCAGCAGTTACTTGTTAATGCCTGGAGGTGGTTCACATCTTAATGCCAACAATCTCAAATATGGAGTTCAACAGTTCAAGCCTGTTCCTGCTGGAAGTCCTACAGGGTTTGGAAATTTTGCTAACCCAACTGGATATGCCATGATTACTCCTGGTGTGGTTGGGGGTGCAACGGCTTTAGAAGATTCATCTCGAGTCAAGTACAAAGATAATCTTTATGTCCCAAATCCTCAGGCTGAGACATCAGAAATTTGGTTACAGAATCCAAGGGACCATCCTGGCATGCAATCTACTCCATACTATAACATGCCAGGGCAAACACCTCATGCGGCTTACATGCCATCACACACTGGTCATGCTTCCTTCAATGGAGCCACAGCTCAGTCTTCTCACATGCAGTTCCCCGGCATGTACCACACCCCTCCACAGCCGGCAGCCATGGCTAGTCCTCACCATTTAGGACCACCAGCCATTGGCAACAATGTTGGAGTTGGGGTGGCTGCAGCTGCTCCTGGAGCACAGGTTGGTGCATATCAGCAGCCTCAATTGGGCCACATCAACTGGACAACAAATTTCTGA 2583 0.4506 MVPGSKTEGGGTGTTHLLSARVRKTIQSIKEIVGNHSDADIYVALKEANMDPNETTQKLLNQDPFHEVKRRRDRKKETQNVGNRGQPSADSRRPSENNSGQGMKFHTHSERNVRRTNYSRSTFPGISREFRVVRDNRVNHIYKEVTPLSQQHSTSVTEQLNVNISDKGSSISTNHRSSGSRNSSQASNGPSDSHARYAPKTIDRKIVYEDKDKQGMISNAAGRVQPIKPNSVHQNSALVASTSSAVGVYSSSTDPVHVPSPDSRSPGVVGAIRREVGFVGVRRQSSDNKAKQSFAPSSPHVVGKDGTSADSFQSVGAVSKTEQFSQTNVTEPSLSGMPVSRPSLNNQHNNRPHQQLVGHQRVSQQNKEWKPKSSQKPNCNNSPGVIGTPKKAAAAASPPAENSGDIESNTVELQDKLSQVNIYENQNVIIAQHIRVPETDRCRLTFGTIGTELDSSRPQSKYHIIGASEKSNEELTASLTVPAPELSTDDVSGSKQVDLRDEHIRSLGSDSPVSGATSEQQLPDNKDSSNTKNLDNYANIGLVRDSSPSYAPSEQQQQDSHDMPGFAAYDSPAGYDIPYFRPTIDETVRGQGLSSPQEALISHPTNTPASTIAMVQQQQPPVPQMYPQVHVSHFANLMPYRQFLSPVYVPPMAMPGYSSNPPYPHPTNGSSYLLMPGGGSHLNANNLKYGVQQFKPVPAGSPTGFGNFANPTGYAMITPGVVGGATALEDSSRVKYKDNLYVPNPQAETSEIWLQNPRDHPGMQSTPYYNMPGQTPHAAYMPSHTGHASFNGATAQSSHMQFPGMYHTPPQPAAMASPHHLGPPAIGNNVGVGVAAAAPGAQVGAYQQPQLGHINWTTNF* 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0042 860 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 1 860 - -
Gso16g0042 860 MobiDBLite consensus disorder prediction 307 385 - -
Gso16g0042 860 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 1 860 - -
Gso16g0042 860 MobiDBLite consensus disorder prediction 282 406 - -
Gso16g0042 860 Pfam GBF-interacting protein 1 N-terminal 20 77 IPR009719 -
Gso16g0042 860 MobiDBLite consensus disorder prediction 506 565 - -
Gso16g0042 860 MobiDBLite consensus disorder prediction 164 201 - -
Gso16g0042 860 MobiDBLite consensus disorder prediction 81 106 - -
Gso16g0042 860 SUPERFAMILY UBA-like 21 79 IPR009060 GO:0005515
Gso16g0042 860 MobiDBLite consensus disorder prediction 510 562 - -
Gso16g0042 860 MobiDBLite consensus disorder prediction 164 194 - -
Gso16g0042 860 MobiDBLite consensus disorder prediction 54 120 - -
Gso16g0042 860 MobiDBLite consensus disorder prediction 63 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0042 Gso-Chr16 471657 480252 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0042 - - gmx:100806038 1644.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0320 7 2999530 3008660 Gso16g0042 16 471657 480252 GST