Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0040 ATGTCTTTGCTTCGACGGAGAAAAGGGTCGGAACCGGGAAAGGGTCCGAGCCATAGTTCGGAACCGAAGGTTCTAAGCGAAGAGGAGACAGAAGATGATAAGAATAAGAAAAATAAGAAGAAGAAGAACAACAAATGGTCGTGCTTCGATAGCTGTTGTTGGGGGGTGGGGTGCATTTGCACTTTGTGGTGGTTTCTTCTGTTTCTGTATCAGATGATGCCTTCTTCGATTCCCCAGTATGTGACTGAGGCCTTCACTGGGCCCATGCCGGACCCACCGGGCCTCAAGCTCAAGAAGGAAGGGCTCAAGGTGAAGCACCCTGTGGTTTTTGTGCCAGGGATTGTCACTGGTGGGCTTGAACTGTGGGAGGGTCACCAGTGTGCTGAAGGGTTGTTCAGGAAACGCTTGTGGGGTGGTACTTTTGGAGAAGTCTATAAAAGACCTTCATGCTGGGTGGATCACATGTCACTGGACAATGAAACAGGATTGGATCCACCAGGCATAAGAGTTAGGCCTGTCTCTGGACTTGTAGCTGCTGATTACTTTGCTGCAGGATACTTCGTTTGGGCAGTCCTAATTGCTAACTTGGCACGCATTGGTTATGAAGAAAAAACTATGTACATGGCTGCATATGATTGGAGAATAGCATTTCAGAACACTGAGGTGAGGGATCAAACACTAAGTCGGATAAAAAGCAACATAGAACTTATGGTTGCTACTAATGGTGGAAATAAGGCAGTTATTATTCCACATTCAATGGGGGTCTTGTACTTCCTACATTTTATGAAATGGGTTGAAGCACCAGCTCCAATGGGTGGTGGGGGAGGACCAGATTGGTGCTCCAAATATATAAAGGCAGTTGTAAACATTGGTGGACCATTTTTAGGTGTTCCCAAGGCTATAGCAGGGCTATTCTCAGCTGAGGCCAGGGATATTGCTGTTGCCAGGACGATAGCTCCAGGATTTTTAGATAACGATCTGTTTCGCATTCAAACCTTGCAACATGTAATGAAGATGACCCGTACTTGGGACTCAACAATGTCAATGATACCAAGAGGAGGAGATACTATATGGGGTGGTCTTGATTGGTCACCAGAAGAAGGCTATCACCCTAGCCAGAGGAAGCATAGCAGTGACTATACTCAGTTAACAGACCAAGAGACAAATCAAACAAATGTTGTCAACTATGGAAGAATGATATCATTTGGCAGAGATGTGGCCGAGGCACACTCCTCTAAGATTGAGATGGCTGACTTTCGGGGTGCCATCAAGGGTCGCAGTGTTGCAAATACCACCTGTCGTGATGTGTGGACTGAATACCATGAAATGGGATTTGAGGGAGTGAGAGCAGTTGCTGAACATAAAGTTTACACAGCTGGCTCTATCGTAGAACTCCTTCAATTTGTTGCTCCAAAGATGATGGCTCGTGGTAGTGCTCATTTCTCTTATGAAATTGCTGACAATTTGGATGACCCTAAATATAATCACTACAAGTATTGGTCAAACCCTTTGGAAACAAAACTACCAAATGCTCCTGATATGGAAATCTTCTCTATGTATGGAGTTGGCTTACCAACTGAAAGATCTTATATTTACAAGTTAACTCCCTTTGCCGAGTGTTACATTCCTTTTGAAATTGACACCACGCAAGATGGTGGAAGTGATGAAGATAGTTGTCTGCAAGGTGGAGTCTACACTGTTGATGGGGATGAGACTGTGCCAGTTCTAAGTTCAGGCTTCATGTGTGCTAAAGGCTGGCGCGGAAAAACAAGATTCAACCCGTCTGGTATGCGCACCTACGTTAGAGAATATGATCATTCTCCTCCAGCCAACCTTCTAGAGGGAAGGGGCACACAAAGTGGTGCTCATGTTGACATCATGGGAAACTTTGCATTGATTGAGGATGTTATAAGAGTGGCTGCTGGAGCCAAAGGAGAAGATCTAGGAGGTGATAAAGTGTATTCTGATATCTTCAAGTGGTCTGAGAAAATCAAGTTACCCCTATGA 2007 0.4499 MSLLRRRKGSEPGKGPSHSSEPKVLSEEETEDDKNKKNKKKKNNKWSCFDSCCWGVGCICTLWWFLLFLYQMMPSSIPQYVTEAFTGPMPDPPGLKLKKEGLKVKHPVVFVPGIVTGGLELWEGHQCAEGLFRKRLWGGTFGEVYKRPSCWVDHMSLDNETGLDPPGIRVRPVSGLVAADYFAAGYFVWAVLIANLARIGYEEKTMYMAAYDWRIAFQNTEVRDQTLSRIKSNIELMVATNGGNKAVIIPHSMGVLYFLHFMKWVEAPAPMGGGGGPDWCSKYIKAVVNIGGPFLGVPKAIAGLFSAEARDIAVARTIAPGFLDNDLFRIQTLQHVMKMTRTWDSTMSMIPRGGDTIWGGLDWSPEEGYHPSQRKHSSDYTQLTDQETNQTNVVNYGRMISFGRDVAEAHSSKIEMADFRGAIKGRSVANTTCRDVWTEYHEMGFEGVRAVAEHKVYTAGSIVELLQFVAPKMMARGSAHFSYEIADNLDDPKYNHYKYWSNPLETKLPNAPDMEIFSMYGVGLPTERSYIYKLTPFAECYIPFEIDTTQDGGSDEDSCLQGGVYTVDGDETVPVLSSGFMCAKGWRGKTRFNPSGMRTYVREYDHSPPANLLEGRGTQSGAHVDIMGNFALIEDVIRVAAGAKGEDLGGDKVYSDIFKWSEKIKLPL* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0040 668 SUPERFAMILY alpha/beta-Hydrolases 96 496 IPR029058 -
Gso16g0040 668 MobiDBLite consensus disorder prediction 1 43 - -
Gso16g0040 668 PANTHER PHOSPHOLIPID:DIACYLGLYCEROL ACYLTRANSFERASE 1 27 668 - -
Gso16g0040 668 Pfam Lecithin:cholesterol acyltransferase 467 628 IPR003386 GO:0006629|GO:0008374
Gso16g0040 668 Pfam Lecithin:cholesterol acyltransferase 132 403 IPR003386 GO:0006629|GO:0008374
Gso16g0040 668 Gene3D alpha/beta hydrolase 137 334 IPR029058 -
Gso16g0040 668 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 27 668 - -
Gso16g0040 668 MobiDBLite consensus disorder prediction 21 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0040 Gso-Chr16 443728 449234 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0040 148 668 Acyl Lipid Metabolism Gene Families AT5G13640 75.143 0.0 826
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0040 K00679 - gmx:100812643 1337.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0318 7 2966854 2971858 Gso16g0040 16 443728 449234 GST