Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0033 ATGAACGTTGAAAGCGAGAGGAAAGATGAACAAGAGGTGAAAGGGTGGAGAAAAGCTTTAAAAAGTGTAGGGAATTGGCTGGCACATAAGGATAAGGATGAATGGTTGAAGGACATGAGGGGAGTGCTGAGTTTGGTGTCTACGGTGATCGCAACAATGACCTTTCAAAGTGCTTTAAATCCACCAGGTGGAGTTAGACCCGGAAACGAGAGTGGAGTTGTTCAATGTCCAGAAAACAGTGCAGATAATAATCCATGTCCCGGAGAATCTATCCTAGCTGTTCTTTACCCTGATGAATATAAAATATTCCTCATTTGGAACACAACATGTTTCATTTCATCTTTAGCAGTGTGTCTCTTGCTTGTAAGTGGGTTCCCTCTCAATCACAGATTCTTCACCTGGCTTTTGTCAATAGGGATGTGCATCACCATCTCCAGCCTCACTCTTACCTACATGACTGGTGCGGGAATGGTCACCCCGGATCCCCTTTGGAATACAACCAACTCCATGTTTAATAAAGTTATTTATATTTGGATTTCACTGCTAGGACTCGTCGCATTTGTCCTTTGCCTACGCCTAATTGTTTGGATTGTCTTTGCCTGCAGGTAA 609 0.4319 MNVESERKDEQEVKGWRKALKSVGNWLAHKDKDEWLKDMRGVLSLVSTVIATMTFQSALNPPGGVRPGNESGVVQCPENSADNNPCPGESILAVLYPDEYKIFLIWNTTCFISSLAVCLLLVSGFPLNHRFFTWLLSIGMCITISSLTLTYMTGAGMVTPDPLWNTTNSMFNKVIYIWISLLGLVAFVLCLRLIVWIVFACR* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0033 202 Pfam Domain of unknown function 34 155 IPR026961 -
Gso16g0033 202 PANTHER REPEAT FAMILY PROTEIN, PUTATIVE-RELATED 121 165 - -
Gso16g0033 202 PANTHER REPEAT FAMILY PROTEIN, PUTATIVE-RELATED 3 36 - -
Gso16g0033 202 PANTHER REPEAT FAMILY PROTEIN, PUTATIVE-RELATED 40 92 - -
Gso16g0033 202 PANTHER CASKIN 40 92 - -
Gso16g0033 202 PANTHER CASKIN 121 165 - -
Gso16g0033 202 PANTHER CASKIN 3 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0033 Gso-Chr16 361267 362589 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0033 4 194 Miscellaneous Gene Families AT1G10340 23.196 2.75e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0033 - - gmx:100815832 420.239