Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g2189 ATGAGAAATATGGGAATGTCTTCGATGAGTTTCCTCATTGCTTTTCTAGGATGTCTAGTTCTTGCTGCTCTGATTCAAGCGCAGGACCAATCAGGATTCATCAGCATAGATTGCGGAACTCCTGAAATGAACTACACTGAGCAGTCAACAGGCCTAAATTATACTTCAGATGCAAATTTCATAAACACTGGTGTGAGAAAGTCAATAGCATCTCAACTAAGAAATGGGTATCTGAAACACATGTGGTATGTCAGAAGCTTTCCGGAAGAAGGAAAAAGGAACTGTTACAAAATAGAAATCACAAGAGGCACTAAGTATCTCATCAGGGTAGCGTTCTTGTATGGAAACTACGACGGTCAAAATATGCTGCCTCAGTTTGATCTTCTTCTTGGGGCTAGTCAGTGGGCTACAGTGACTATAAAAAATGCAACCATTGACCAGGCTGAGGAGATCATACATGTACCTTCACTAGATTACCTACAAATCTGTCTGGTTGACACAGGCCATGGGACACCATTTATATCATCTATAGAATTGAGGACTTTGAGAGATGACATTTATGTCACTCGATTTGGATCGTTGCAAAATTACCTCAGATGGGATTTAGGTTCTAGCAGAGGTTACAGGTACAACTATGATGTTTATGATCGTTACTGGAGCTACGGCAACATCAATGAATGGAAAATATTAAGTGCTTCTATTACTGCTGATTCTTTAGACCAGAGCCAGGATGATTTCAAAGTGCCAGCAATTGTTCTGAGCACTGCAATTACACCACTAAATGCTAGTGCTCCATTGGTAATATTGTGGGAGCCAGAACATCAAACTGAGCAATTCTATGTTTACATGCACTTCACAGAGATTGAAGAGTTAGCAAAGAATCAGACTAGAGAATTCAACATCACCTTGAATGGAAAGTCATGGTTTACAAATTTGTCTCCACAGTACCAAGGTGTCACCACTATCCGGAGCAAGTCAGGCACCAGTGGGAAAATAATTATATTTTCACTTGAGATGACTGAGAATTCAACCCTACCTCCCATCATCAATGCCATTGAAATCTATAAAGTTATAGAGTTCCAACAAGCAGACACATACCAAGGAGATGTTGATGCGATTACAACCATCAAGTCTGTTTATGAGGTGACAAGAGACTGGCAAGGTGATCCATGCGCCCCTATAGACTACTTGTGGCAGGGTCTGAATTGTAGTTATCCCGAAAATGATTCTCCAAGAATCACAAGTTTGAATTTATCTTCAAGTGGATTATCAGGAAAGATAGACCTTTCGATCTCAAAGCTCACCATGTTGGAGAACTTGGATTTATCAAACAATAGCTTAAACGGTGAAATTCCCGAATTTCTGTCTCAACTACAACACTTGAAGATATTAAACTTGGAGAAGAACAACCTCTCCGGCTCAATTCCACCAGCACTAAATGAAGGTTCTGTCTCACTAAGTGTGGGCCAAAATCCATATCTATGTGAATCTGGTCAATGCAACGAGAAGGAAAATGAAAAGGAACAAGAAAAGAAAAAGAAGAATATTGTTACACCCTTGGTAGCATCTGTTGGTGGGGTTGTGATCCTTCTGGTGGTTATGGCAGCTATATTGTGGACTATTAAAAGGAGAAGATCAAAAGATTTGATGGTAGAAAAGGATCCAAGTCAGATCTCACCGCAATACACAGAACAAGATGATTCATTACTGGAATTCAAAAAACAAATATATTCATACTCTGATGTCCTTAAAATCACCAACAATTTCAATACAATTGTTGGTAAAGGAGGATTTGGAACAGTTTATCTGGGCTATATTGATGACACTCCAGTTGCAGTGAAAATGCTTTCCCCATCGGCCGTTCAAGGTTATCAACAATTTCAAGCTGAGGTTAAACTTCTAATGAGAGTTCATCACAAAAATTTGACCTCCCTTGTTGGTTATTGTAATGAGGGAACCAATAAGGCTCTCATATACGAGTACATGGCTAATGGAAACTTACAAGAACATCTATCTGGTAAACGCAGCAAAACAAAAATCTTGAGCTGGGAAGACAGACTTCGTATAGCAGTGGATGCAGCCTCAGGATTGGAGTATCTGCAAAATGGTTGCAAGCCACCTATAATCCACAGAGACGTAAAATCTACAAATATCTTGTTGAATGAACACTTTCAAGCAAAATTATCTGATTTTGGTCTATCCAAAATTATCCCAACTGACGGGGGAACTCATGTGTCAACTGTTGTTGCTGGTACTCCTGGTTATCTAGACCCTGAGTACTACAAAACCAATAGATTAACAGACAAGAGTGATGTCTATAGCTTTGGTGTTGTTCTTTTGGAGATAATCACAAGTCAACCAGTGATAGCGAGGAATCAAGAAAAGATTCATATAAGTCAATGGGTTAACTCCTTGATGGCGAAAGGAGATATCAAGGCCATTGTTGACTCAAAGTTAGATGGAGATTTTGATAGTAACTCAGTTTGGAAAGCAGTGGAAATAGCAACGGTTTGTGTGTCTCCAAATCCCGACCGAAGGCCAATCATAAGTGTGATAGTGACTGAACTGAAGGAGTCTTTGGCAATGGAAATAGCTCGAACTAAATATAGCAGTGCCGATACAAGAGATTCAGTTAAACTTGTAACCATGAATCTGAGTACCCAAGTTGTTCCCCAGGCCAGGTAA 2685 0.397 MRNMGMSSMSFLIAFLGCLVLAALIQAQDQSGFISIDCGTPEMNYTEQSTGLNYTSDANFINTGVRKSIASQLRNGYLKHMWYVRSFPEEGKRNCYKIEITRGTKYLIRVAFLYGNYDGQNMLPQFDLLLGASQWATVTIKNATIDQAEEIIHVPSLDYLQICLVDTGHGTPFISSIELRTLRDDIYVTRFGSLQNYLRWDLGSSRGYRYNYDVYDRYWSYGNINEWKILSASITADSLDQSQDDFKVPAIVLSTAITPLNASAPLVILWEPEHQTEQFYVYMHFTEIEELAKNQTREFNITLNGKSWFTNLSPQYQGVTTIRSKSGTSGKIIIFSLEMTENSTLPPIINAIEIYKVIEFQQADTYQGDVDAITTIKSVYEVTRDWQGDPCAPIDYLWQGLNCSYPENDSPRITSLNLSSSGLSGKIDLSISKLTMLENLDLSNNSLNGEIPEFLSQLQHLKILNLEKNNLSGSIPPALNEGSVSLSVGQNPYLCESGQCNEKENEKEQEKKKKNIVTPLVASVGGVVILLVVMAAILWTIKRRRSKDLMVEKDPSQISPQYTEQDDSLLEFKKQIYSYSDVLKITNNFNTIVGKGGFGTVYLGYIDDTPVAVKMLSPSAVQGYQQFQAEVKLLMRVHHKNLTSLVGYCNEGTNKALIYEYMANGNLQEHLSGKRSKTKILSWEDRLRIAVDAASGLEYLQNGCKPPIIHRDVKSTNILLNEHFQAKLSDFGLSKIIPTDGGTHVSTVVAGTPGYLDPEYYKTNRLTDKSDVYSFGVVLLEIITSQPVIARNQEKIHISQWVNSLMAKGDIKAIVDSKLDGDFDSNSVWKAVEIATVCVSPNPDRRPIISVIVTELKESLAMEIARTKYSSADTRDSVKLVTMNLSTQVVPQAR* 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g2189 894 Pfam Protein tyrosine and serine/threonine kinase 590 856 IPR001245 GO:0004672|GO:0006468
Gso15g2189 894 SUPERFAMILY Protein kinase-like (PK-like) 566 854 IPR011009 -
Gso15g2189 894 Gene3D Ribonuclease Inhibitor 371 495 IPR032675 -
Gso15g2189 894 PANTHER OS07G0107800 PROTEIN-RELATED 19 894 - -
Gso15g2189 894 ProSitePatterns Serine/Threonine protein kinases active-site signature. 708 720 IPR008271 GO:0004672|GO:0006468
Gso15g2189 894 PANTHER PUTATIVE-RELATED 19 894 - -
Gso15g2189 894 Gene3D Phosphorylase Kinase; domain 1 570 661 - -
Gso15g2189 894 CDD STKc_IRAK 593 858 - -
Gso15g2189 894 SMART serkin_6 587 862 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g2189 894 SUPERFAMILY L domain-like 385 479 - -
Gso15g2189 894 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Gso15g2189 894 Pfam Malectin-like domain 36 357 IPR024788 -
Gso15g2189 894 ProSitePatterns Protein kinases ATP-binding region signature. 593 614 IPR017441 GO:0005524
Gso15g2189 894 Gene3D Transferase(Phosphotransferase) domain 1 662 881 - -
Gso15g2189 894 ProSiteProfiles Protein kinase domain profile. 587 860 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g2189 Gso-Chr15 50349757 50358687 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g2189 4 894 Receptor kinase-like Gene Family AT1G51800 48.512 0.0 844
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Gso15g2189 Malectin_like 3e-111 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g2189 - - gmx:100818475 1730.3