Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1649 ATGAGTAACATGACTTCCTTAAGCTCCTTAGTGCTGCTCCTTGCAGCTCTAATTCTATTCCCTCAAGTTCTTGCTGACTATGAGAAGGCCCCGGTGTACAAGCCTCCCATTGAGAAGCCACCACTTTACAAGCCCCCAATTGAGAAACCTCCTGTTTATAAACCTCCAGTTGAGAAACCCCCCATTTATAAGCCCCCAGTAGAGAAGCCACCAGTGTACAAGCCTCCAGTAGAGAAACCCCCAGTTTACAAGCCCCCAGTTGAAAAACCACCAGTTGAGAAACCCCCAGTAGAGAAGCCTCCAGTTTACAAGCCCCCAGTTGAAAAACCACCAGTGTACAAGCCACCAGTTGAGAACCCTCCAATTTACAAACCCCCAGTTGAAAAACCACCAGTATACAAGCCCCCAATTGAGAAACCTCCAGTTTATAAGCCACCAGTAGAGAAGCCACCGGTTGAGAAGCCTCCAGTCTACAAGCCACCATATGGAAAGCCACCATACCCAAAGTACCCTCCAATTGATGACACCCATTTCTGA 537 0.4804 MSNMTSLSSLVLLLAALILFPQVLADYEKAPVYKPPIEKPPLYKPPIEKPPVYKPPVEKPPIYKPPVEKPPVYKPPVEKPPVYKPPVEKPPVEKPPVEKPPVYKPPVEKPPVYKPPVENPPIYKPPVEKPPVYKPPIEKPPVYKPPVEKPPVEKPPVYKPPYGKPPYPKYPPIDDTHF* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1649 178 MobiDBLite consensus disorder prediction 63 172 - -
Gso15g1649 178 PRINTS Adhesive plaque protein signature 64 85 IPR002964 GO:0005576
Gso15g1649 178 PRINTS Adhesive plaque protein signature 103 120 IPR002964 GO:0005576
Gso15g1649 178 PRINTS Adhesive plaque protein signature 129 148 IPR002964 GO:0005576
Gso15g1649 178 PANTHER - 136 171 - -
Gso15g1649 178 PANTHER - 4 152 - -
Gso15g1649 178 MobiDBLite consensus disorder prediction 63 178 - -
Gso15g1649 178 Pfam Extensin-like protein repeat 130 139 IPR003883 GO:0005199
Gso15g1649 178 Pfam Extensin-like protein repeat 155 162 IPR003883 GO:0005199
Gso15g1649 178 Pfam Extensin-like protein repeat 50 59 IPR003883 GO:0005199
Gso15g1649 178 Pfam Extensin-like protein repeat 110 119 IPR003883 GO:0005199
Gso15g1649 178 Pfam Extensin-like protein repeat 90 99 IPR003883 GO:0005199
Gso15g1649 178 Pfam Extensin-like protein repeat 140 149 IPR003883 GO:0005199
Gso15g1649 178 Pfam Extensin-like protein repeat 70 79 IPR003883 GO:0005199
Gso15g1649 178 Pfam Extensin-like protein repeat 120 129 IPR003883 GO:0005199
Gso15g1649 178 Pfam Extensin-like protein repeat 40 49 IPR003883 GO:0005199
Gso15g1649 178 Pfam Extensin-like protein repeat 31 39 IPR003883 GO:0005199
Gso15g1649 178 Pfam Extensin-like protein repeat 150 159 IPR003883 GO:0005199
Gso15g1649 178 Pfam Extensin-like protein repeat 80 89 IPR003883 GO:0005199
Gso15g1649 178 Pfam Extensin-like protein repeat 100 109 IPR003883 GO:0005199
Gso15g1649 178 Pfam Extensin-like protein repeat 145 154 IPR003883 GO:0005199
Gso15g1649 178 Pfam Extensin-like protein repeat 60 69 IPR003883 GO:0005199
Gso15g1649 178 PANTHER EARLY NODULIN-11 136 171 - -
Gso15g1649 178 PANTHER EARLY NODULIN-11 4 152 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1649 - K14005 gmx:100808321 50.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1649 15 24546082 24546875 Gso9g0776 9 12750099 12751306 GST