Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1627 ATGAGTTCTCGTATTCGGCTTCTGGGTATTTGCTTGTGGCTGCACTTGACATGCTTCACCTTCATTTTTGGCAACATAGTGAGTGTAAGAGGAGATGCAACTTTGCAAGGGACTGTTGCCATTGATGACAAGGTTGTGATTGGAACCATTGATGATGATTTTGTTTGTGCAACTTTGGATTGGTGGCCTCCTGAGAAATGTGACTATGGAAGATGCAGTTGGGGACTTGCTTCTCTTCTCAATCTGGACCTCAACAACAAGATTTTCTTAAATGCAGTGAAAGCCTTTTCACCTTTGAAACTTAGACTAGGTGGAAGTTTGCAAGACAAGGTAATATATGGCACTGAAGATAACCACCAACCTTGTACACCTTTTGTTAAGAACCCTTCTGAGATGTTTGGTTTCACTCAAGGGTGCCTCCCAATGGATAGATGGGATGAACTTAACTACTTTTTTGAAAAAGCTGGAGCTAAGATTATCTTTGGATTAAATGCTCTTGCTGGAAAATCAATACACAGTGGTTCTGCAAAAGGACCTTGGAACTACACCAATGCCGAGTCCTTTATTCGATATACTGTTGGAAATGGCTACAGCATTTATGGATGGGAACTTGGCAATGAATTGAGTGGGAGTGGAGTTGGAACAAGCATTACAGCAGACCAATATGCTTTGGATGTTGCTGCTTTACACGACGTAGTTTACAATGCATATGAAAAGACTGAGCCTAAGCCACTAGTAATTGCACCTGGAGGTTTCTTTGATGCAAACTGGTTCAACATATTTATAAGCAAATCAGGAAAATCTATTGATGTGGTCACTCACCACATTTATAACCTTGGACCAGGAGTTGATGAGCACCTGGTGGAAAGAATTCTGGACCCTTCCTATCTTGATAAAGAGGCTAGCACATTCAGTGGCCTAAAAAATATACTTGCAAGTACAGGTACCTCAGCAACAGCATGGGTTGGTGAGTCTGGAGGTGCCTACAATAGTGGCCATCATCTTGTATCCGATGCATTTGTTTACAGTTTCTGGTATTTGGATCAGCTTGGCATGTCAGCTGCTTATGACACTAAAACATATTGCAGACAGAGTTTGATAGGAGGAAACTATGGTTTACTCAATACTACGAATTTTCTGCCAAATCCAGATTACTATAGTGCTCTTCTTTGGCACCGACTCATGGGAAGACATGTCCTCTCAACTACCTTCTCTGGGACAAACAAGATAAGAGCTTATGCACACTGTGCAAAGCAATCAAAAGGAATCACAGTACTATTGATCAACCTGGACAGCAACACAACTGTTGAAGCTGAAGTGACCTTCAACAACAACGCTGAGAGTTTGAGGCACAGAAAGATGTCTAGTCATTCAAAAAGGATGGAACTGCCTCTTGCAAGTGAAACAGCAAGAGAGGAGTACCATCTAACTCCACAGGATGGGGATATACATAGCCAAACAATGGTACTAAATGGAAAAGCTCTGAGTGTAAACTCAGATGGTGACATTCCTCCTTTGGAGCCTATATATGTGAACTCATCAGAGCCAATAAGGGTTGCTGCTTTCTCTATTGTATTTGCCCATTTACCTGATGCTGTTGTTTCAGCCTGTGGCTAA 1617 0.4181 MSSRIRLLGICLWLHLTCFTFIFGNIVSVRGDATLQGTVAIDDKVVIGTIDDDFVCATLDWWPPEKCDYGRCSWGLASLLNLDLNNKIFLNAVKAFSPLKLRLGGSLQDKVIYGTEDNHQPCTPFVKNPSEMFGFTQGCLPMDRWDELNYFFEKAGAKIIFGLNALAGKSIHSGSAKGPWNYTNAESFIRYTVGNGYSIYGWELGNELSGSGVGTSITADQYALDVAALHDVVYNAYEKTEPKPLVIAPGGFFDANWFNIFISKSGKSIDVVTHHIYNLGPGVDEHLVERILDPSYLDKEASTFSGLKNILASTGTSATAWVGESGGAYNSGHHLVSDAFVYSFWYLDQLGMSAAYDTKTYCRQSLIGGNYGLLNTTNFLPNPDYYSALLWHRLMGRHVLSTTFSGTNKIRAYAHCAKQSKGITVLLINLDSNTTVEAEVTFNNNAESLRHRKMSSHSKRMELPLASETAREEYHLTPQDGDIHSQTMVLNGKALSVNSDGDIPPLEPIYVNSSEPIRVAAFSIVFAHLPDAVVSACG* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1627 538 Gene3D Glycosidases 73 393 - -
Gso15g1627 538 PANTHER HEPARANASE-LIKE PROTEIN 3 5 537 - -
Gso15g1627 538 Pfam Glycosyl hydrolase family 79, N-terminal domain 37 351 IPR005199 GO:0016020|GO:0016798
Gso15g1627 538 SUPERFAMILY (Trans)glycosidases 50 395 IPR017853 -
Gso15g1627 538 PANTHER HEPARANASE-RELATED 5 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1627 Gso-Chr15 23718238 23722836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1627 31 537 Glycoside Hydrolase AT5G61250 47.876 7.07e-179 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1627 K07964 - gmx:100802477 1105.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1627 15 23718238 23722836 Gso9g0763 9 12173756 12179243 GST
Gso17g0724 17 6643801 6645183 Gso15g1627 15 23718238 23722836 PCT
Gso15g1627 15 23718238 23722836 Gso17g0724 17 6643801 6645183 PCT