Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1619 ATGGACGAGTCATGGAGAATGCGAATGGGCCTAACGCGGGGGCTCCCTCGCCGACGGTCCATGGAGGACCGCTCCTCCGCCAGAACTCGGCGTTCCATCTTCGCCGGGGCCGCCGAGCCGGAAACCCTCGACCCCGACGACTTCGCCGACGTCTTCGGAGGCCCGCCGAGGAGCCTCCTCGTGCACAAATTCTCGAGGTCGAATTCGTTCTACGAGGAGATTTTCCGTCCGCCGGAGTTTGCGTCTCCGGCGCCGGCGAAGGGCAGCCGGAGCTTGCCGGTGTTTCGGATTCCGGCGAAGAACGAGGCGTTCTACAGCGACATATTCGGGTCGGACGACGACCGGAGGTCGCGGGAGCGGTCGGGGCCGCAGTCGAAGGCAAAATCAAAGTCGAATTCGTCGTCGGCTCTGAGCTCCGAGGAGCTGAGCCCTCTCCGGACGGCGGTCGGTGATGACGTGGCATTGTCTGCCTTTGCTTCCAAGCTCAGTGATTGTTGCAGGCCAATCAATGTCCCGTGCAGATGGAACTCAACCACTATGATGCCCGGGGAACACCCAATTAAACAAGGGGGGCCACTTTTTCCATGCAATAGTCAGTCATTTGAAATTCAGTTTCAGGACAATGAGTACAAGGAGAGCTTCAAGAGTTCACATTTGGGATTCTCAAGAAGAGTCTCCTCCCCCGAAACTATTAGTCTCGAATCCAATTCATATCAAAGCATGAAGGTATCTGCTGATGACTGGGAAATCAGTTCCCCGTTTTCTGCTGTCTCTGGACTCTGTCAAGAACCTGAGGCAAAATCTTCAGTCCATGATCACTTGTTTCCAGAACTGGTTATAGAGCAGGACGACGACGACGACGAAGTTATGAGCTCCTATGTCATAGAGGTCAACTCTAACCTCAGAGAGGAAAGTTGTGGAACAGCAGACCTTGACGAAGCAATAGCATGGGCCAAGGAGAAGTTTCAATCACGAAATTCTGATGAAGAATCGAGCTCGAGAAATGAAGGCAATGAGCAAGCTACTACAGGAGTGGAAGGAAGGTCTGATGCAGGTGAATGCCACGGTGATGGAATAGGAGAAGTTAAATCTTCGAAGGTACAAACAGAAACAGAGAAGTTGGACAGAGATATAAGATCGTGGTCATCTGGCAAGGAAACTGACATCCGGCTACTCCTTTCAACGCTACATCATATTTTATGGCCTGAGAGTGGCTGGTATGCTGTTCCTCTTCCGAACTTAATAGAAAGTTCACAAGTGAAGAAGGCCTATCAGAAAGCAAGATTATGCCTCCACCCTGACAAACTACAGCAAAGAGGAGCAACATTCCTACAAAAGTATATAGCGGAGAAGGCTTTCTCCATTCTTCAGGATGCATGGACTGCATTCATTTCTGAAGATGTTTCCTTCTAA 1413 0.5124 MDESWRMRMGLTRGLPRRRSMEDRSSARTRRSIFAGAAEPETLDPDDFADVFGGPPRSLLVHKFSRSNSFYEEIFRPPEFASPAPAKGSRSLPVFRIPAKNEAFYSDIFGSDDDRRSRERSGPQSKAKSKSNSSSALSSEELSPLRTAVGDDVALSAFASKLSDCCRPINVPCRWNSTTMMPGEHPIKQGGPLFPCNSQSFEIQFQDNEYKESFKSSHLGFSRRVSSPETISLESNSYQSMKVSADDWEISSPFSAVSGLCQEPEAKSSVHDHLFPELVIEQDDDDDEVMSSYVIEVNSNLREESCGTADLDEAIAWAKEKFQSRNSDEESSSRNEGNEQATTGVEGRSDAGECHGDGIGEVKSSKVQTETEKLDRDIRSWSSGKETDIRLLLSTLHHILWPESGWYAVPLPNLIESSQVKKAYQKARLCLHPDKLQQRGATFLQKYIAEKAFSILQDAWTAFISEDVSF* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1619 470 CDD DnaJ 406 460 IPR001623 -
Gso15g1619 470 MobiDBLite consensus disorder prediction 108 125 - -
Gso15g1619 470 MobiDBLite consensus disorder prediction 322 368 - -
Gso15g1619 470 MobiDBLite consensus disorder prediction 15 29 - -
Gso15g1619 470 MobiDBLite consensus disorder prediction 126 142 - -
Gso15g1619 470 MobiDBLite consensus disorder prediction 350 368 - -
Gso15g1619 470 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 1 465 - -
Gso15g1619 470 SUPERFAMILY Chaperone J-domain 361 466 IPR036869 -
Gso15g1619 470 Gene3D DnaJ domain 365 468 IPR036869 -
Gso15g1619 470 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 1 465 - -
Gso15g1619 470 MobiDBLite consensus disorder prediction 1 49 - -
Gso15g1619 470 MobiDBLite consensus disorder prediction 108 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1619 Gso-Chr15 23498632 23502358 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1619 - - gmx:100801416 892.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1619 15 23498632 23502358 Gso9g0751 9 11842693 11846920 GST