Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1611 ATGCCATCCCTAAAAATGAAGAGCAAAGTAAGCGTGAGCTGTTTAACAGAAACAAAGGATCTTCATGTGTGTCCGAAATCAAAAATAATTTCCAAAAGCCCGTGTTCTAAAATCATGATTTCTACACAAAAGGCTGAAATAGACACCACTGTTCAAAATTGCCTAGATGTTTCCTCAAGGACGCAGCCCAAAGACATTGCATGTGATCAATCTATTGATAACAAAGAATTTCTGGATAAAGAAAACTCTGAATCTGAGCACCAATTTTCTGTTTGTTCCTCTGTCCTGGGAAAAATGGAACTAACCAACACCTGCACAGCAAACTTAGAAACAATTTTTTCTCCTGCTTTTGAGCCCATTGAAGTCCATTCACAACATTATACTGAGAAAGATGCAGTGAGCATTGGTGATACAAACATGGCCGAAGTGGGAGCTGATGAAGGAAGAAGCATATGTGGTTATGAAACATGCGATGTATCAGACTTCTACATTTCTGACATGATCATTACAAACTTACCCTTTGGGGGGAATTCCTTTGATGATGATATCAGTGAAACCAACTGCCTATCTGATTATGGATCTACTGAGCCATCCATGTTTACCGCGTCTGAACAGTACATGATCCTGCCTGCTCTTGAAGATGATATTAAAGTTGGCACTACTTCTGATATCATATCATATGAAGAAACCATGATGGTTCGAGAAAGTGCTAGTTTGTATTCAGCAATGGGTCAGATAAGATCCTGCAACCAGGAGTCTGATGTTAAAAGTGACTTGGATAAATCAGAGTGCTTTGATCCACAGTCATTTATCAAGAATTTACCAGAACTATCAGAAATAGAAGTAAATGGGAAGCCAACCCTAATTCCTAAGCAATCTCCTAGAAGAAAGTCAATAACTCTGGTGCTGGACTTAGATGAGACACTTGTTCATTCTACATTGGAACACTGTGATGATGCGGATTTCACTTTTACTGTCTTCTTCAATTTGAAAGAGTACATAGTATATGTAAAACAGAGGCCTTATCTCCACACATTCTTGGAGAGGGTATCAGAGATGTTTGAAGTAGTAATTTTTACTGCCAGCCAAAGCATATATGCAAAGCAACTACTTGATATATTAGATCCTGATGGAAGATTTATTTCTCGTCGCATGTATCGAGAATCATGCCTTTTTTCAGATGGAAATTACACAAAAGATCTTACTATATTAGGTGTTGATCTTGCAAAAGTTGCCATAATTGATAATTCACCTCAGGTTTTCCGATTGCAAGTGAATAATGGTATTCCTATAAAGAGTTGGTTTGATGATCCATTAGATTGTGCACTGATGTCATTACTTCCCTTTCTAGAGACCTTGGCTGATGCTGATGATGTCCGTCCTATCATTGCAAAGAGATATGGTAACAAAGAATAA 1416 0.3792 MPSLKMKSKVSVSCLTETKDLHVCPKSKIISKSPCSKIMISTQKAEIDTTVQNCLDVSSRTQPKDIACDQSIDNKEFLDKENSESEHQFSVCSSVLGKMELTNTCTANLETIFSPAFEPIEVHSQHYTEKDAVSIGDTNMAEVGADEGRSICGYETCDVSDFYISDMIITNLPFGGNSFDDDISETNCLSDYGSTEPSMFTASEQYMILPALEDDIKVGTTSDIISYEETMMVRESASLYSAMGQIRSCNQESDVKSDLDKSECFDPQSFIKNLPELSEIEVNGKPTLIPKQSPRRKSITLVLDLDETLVHSTLEHCDDADFTFTVFFNLKEYIVYVKQRPYLHTFLERVSEMFEVVIFTASQSIYAKQLLDILDPDGRFISRRMYRESCLFSDGNYTKDLTILGVDLAKVAIIDNSPQVFRLQVNNGIPIKSWFDDPLDCALMSLLPFLETLADADDVRPIIAKRYGNKE* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1611 471 Gene3D - 284 467 IPR023214 -
Gso15g1611 471 SUPERFAMILY HAD-like 288 464 IPR036412 -
Gso15g1611 471 PANTHER NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED 1 469 - -
Gso15g1611 471 PANTHER SCP1-LIKE SMALL PHOSPHATASE 4-RELATED 1 469 - -
Gso15g1611 471 TIGRFAM HIF-SF_euk: dullard-like phosphatase domain 300 463 IPR011948 GO:0016791
Gso15g1611 471 Pfam NLI interacting factor-like phosphatase 300 460 IPR004274 -
Gso15g1611 471 SMART forpap2 297 441 IPR004274 -
Gso15g1611 471 ProSiteProfiles FCP1 homology domain profile. 294 453 IPR004274 -
Gso15g1611 471 CDD HAD_FCP1-like 299 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1611 Gso-Chr15 23213149 23223875 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1611 K17616 - gmx:100799803 929.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1611 15 23213149 23223875 Gso9g0741 9 11551913 11566757 GST