Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1590 ATGGCAACCACTGTGATGACCACTCTCCCCCAATTCAGTGGTCTTAGACCCCAATTCTCAGCTGCCCCTGTGAAGAACTTGGTTGCTGTGCAACCCATGAGTCGCAAGGGGAAGGGTGCATTGGGAGCTCGATGTGACTACATTGGTTCATCCACTAATCTGATTATGGTGGCTTCTACAACCCTGATGCTGTTTGCTGGAAGGTTTGGATTGGCTCCATCAGCAAACAGGAAAGCCACTGCAGGGCTAAAGCTGGAGGTGAGGGACTCAGGCTTGCAGACTGGTGACCCTGCTGGCTTCACCCTTGCTGACACCTTGGCCTGTGGATCTGTTGGCCACATCATTGGGGTTGGGGTTGTTCTTGGTCTCAAGAACATTGGTGCCCTGTAA 390 0.5256 MATTVMTTLPQFSGLRPQFSAAPVKNLVAVQPMSRKGKGALGARCDYIGSSTNLIMVASTTLMLFAGRFGLAPSANRKATAGLKLEVRDSGLQTGDPAGFTLADTLACGSVGHIIGVGVVLGLKNIGAL* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1590 129 PIRSF PsaK 1 129 IPR016370 -
Gso15g1590 129 SUPERFAMILY Photosystem I reaction center subunit X, PsaK 97 123 IPR035982 GO:0009522|GO:0015979|GO:0016020
Gso15g1590 129 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT V, CHLOROPLASTIC-RELATED 1 129 IPR016370 -
Gso15g1590 129 Pfam Photosystem I psaG / psaK 51 127 IPR000549 GO:0009522|GO:0015979|GO:0016020
Gso15g1590 129 ProSitePatterns Photosystem I psaG and psaK proteins signature. 99 116 IPR000549 GO:0009522|GO:0015979|GO:0016020
Gso15g1590 129 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT PSAK, CHLOROPLASTIC 1 129 - -
Gso15g1590 129 Gene3D - 46 129 IPR023618 GO:0009522|GO:0015979
Gso15g1590 129 TIGRFAM PS_I_psaK_plant: photosystem I reaction center PsaK 47 129 IPR017493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1590 Gso-Chr15 22242430 22243947 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1590 K02698 - gmx:100527056 239.965