Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1582 ATGGCTTGTGTGAAATTGGGTTCCAAAGCTGATGCTTTCCAGCGGCAAGGGCAGGCCTGGTTCTGCACGACTGGGCTTCCTAGTGATATAGTTGTTGAAGTTGGAGAGATGTCATTTCATCTTCACAAGTTCCCCTTGCTCTCTAGAAGTGGGGTTCTGGAAAAAATGATTGCCAAGGCTTCTGAGTCAGAGGAAGAATGTGTCATATCCCTCGGTGACATTCCTGGTGGGGCCAAAACATTTGAACTCGTGGCAAAATTTTGTTATGGTGTGAAACTTGAACTTACAGCATCAAATGTTGTGTACCTCTGGTGTGCTGCGGAGAGTCTTGAAATGACTGAGGAATATGGTGAAGGTAATCTTATTTCACAGGCTGAAGCCTTTTTCAATCAAGTGGTCCTCCGTAGTTGGAAAGACTCTCTGAGAGCACTTCAAACCTGTGATGATGTTTCGGCCCATGCTGAAGAGCTCCACATTGTGAAAAGATGCATTGAATCACTGGCAGCAAAGGCATCTACTGACCCAAATTTATTTGGGTGGCCAGTGCTGGAGCGTGGTGGTCCCTTGCAGAGCCCTGGTGGAAGTGTTTTGTGGAATGGAATAAGTACTGGGGCAAGACCAAAAAATTCGAGTTCAGATTGGTGGTACGAGGATGTAACAAATTTGAGTTTACCTCTTTTTAAGACATTGATAGCTGTCATGGAATCTCGAGGCATTAGGCAGGAAATTATTGCCGGTTCTCTTGCTTTCTATGCTAAAACATATCTGCCTGGGTTAAATCGACGTCAGGTTTCTGGCGAGTCCAGTACCCGTCTGTCACAGGTAGCCATGGGGTCTCCACTATCAGAAGACAACCAGAAGATTCTACTGGAAGAGATTGATGGATTGCTCCCAATGCAGAAGGGCCTGGTTCAAACAAAGCTCTTGTTTGGTCTACTACGAACAGCCATGATTCTACGAGTGAGCCCCTCTTGCATATCAAACTTGGAGAAACGGATTGGCTTGCAGCTTGATCAAGCTACTCTGGAAGATCTCTTGATGCCAAATTTCTCATATTCAATGGAGACACTTTACAATGTTGACTGTGTGCAAAGAATTCTTGATCATTTCCTTGCCATGGATCAGGTTACTGGAGGTGCCTCTCCATGCTCAATTGATGATGGTCAATTGATTGGATCGCCTTCACTGACTCCAATCACCACGGTAGCAAAGCTGATTGATGGTTACCTTGCAGAGGTTGCACCTGATATTAATTTAAAACTTCCCAAGTTTCAAACCCTTGCCGCTGCTGTTCCAGAGTATGCCAGGCCTTTGGATGATGGTTTATATCGTGCCATAGATATTTATTTTAAGTCTCACCCATGGTTGGTGGAGTCAGAGAGAGAGCAACTATGTAGGCTGATGGATTGTCAGAAGCTCTCATTAGAAGCATGCACTCACGCTGCACAGAATGAGAGGCTACCCATCAGAATAATAGTTCAAGTTCTATTTTTTGAGCAGCTCCAGCTTCGCACTTCTATTGCCGGTTGCTTTCTAGTTTCAGATAACCTCGATGGATCGAGGCAGTTGAGAAGTGGTTTTGTCGGATCTACGGAGGGTGGCTGGGCGTCAGCCGTGAAGGAAAACCAGGTTTTGAAAGTGGGAATGGATAACATGAGGATGAGGGTGTCTGAGCTTGAGAAGGAGTGCTCAAACATGAGGCAGGAGATTGAGAAATTGGGTCGGGTGAAGGGATCGAGCGCTTGGGGAACTGTGTCTAAGAAACTTGGGTTTAAGTTAAAGTCTCAGATGTGTAGTGCTCAAGAAGGGTCTGTTAGCAACCAGAACAATGCAAATAATACGGTTGAGAAGTTGAAGGAAAGACATGTAAAGCACAAGAGAAGTTCTTCTATTAGTGACAAAGCATCAGTCTCTTCAATTGTTCATTCGTAG 1932 0.4503 MACVKLGSKADAFQRQGQAWFCTTGLPSDIVVEVGEMSFHLHKFPLLSRSGVLEKMIAKASESEEECVISLGDIPGGAKTFELVAKFCYGVKLELTASNVVYLWCAAESLEMTEEYGEGNLISQAEAFFNQVVLRSWKDSLRALQTCDDVSAHAEELHIVKRCIESLAAKASTDPNLFGWPVLERGGPLQSPGGSVLWNGISTGARPKNSSSDWWYEDVTNLSLPLFKTLIAVMESRGIRQEIIAGSLAFYAKTYLPGLNRRQVSGESSTRLSQVAMGSPLSEDNQKILLEEIDGLLPMQKGLVQTKLLFGLLRTAMILRVSPSCISNLEKRIGLQLDQATLEDLLMPNFSYSMETLYNVDCVQRILDHFLAMDQVTGGASPCSIDDGQLIGSPSLTPITTVAKLIDGYLAEVAPDINLKLPKFQTLAAAVPEYARPLDDGLYRAIDIYFKSHPWLVESEREQLCRLMDCQKLSLEACTHAAQNERLPIRIIVQVLFFEQLQLRTSIAGCFLVSDNLDGSRQLRSGFVGSTEGGWASAVKENQVLKVGMDNMRMRVSELEKECSNMRQEIEKLGRVKGSSAWGTVSKKLGFKLKSQMCSAQEGSVSNQNNANNTVEKLKERHVKHKRSSSISDKASVSSIVHS* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1582 643 Coils Coil 608 628 - -
Gso15g1582 643 PANTHER - 1 617 - -
Gso15g1582 643 CDD BTB_POZ_NPY3-like 19 122 - -
Gso15g1582 643 Coils Coil 542 576 - -
Gso15g1582 643 Gene3D Potassium Channel Kv1.1; Chain A 11 132 IPR011333 -
Gso15g1582 643 Pfam BTB/POZ domain 27 113 IPR000210 GO:0005515
Gso15g1582 643 ProSiteProfiles NPH3 domain profile. 213 502 IPR027356 -
Gso15g1582 643 MobiDBLite consensus disorder prediction 619 643 - -
Gso15g1582 643 SUPERFAMILY POZ domain 16 114 IPR011333 -
Gso15g1582 643 ProSiteProfiles BTB domain profile. 28 97 IPR000210 GO:0005515
Gso15g1582 643 Pfam NPH3 family 213 478 IPR027356 -
Gso15g1582 643 PANTHER OS12G0117600 PROTEIN 1 617 IPR043454 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1582 Gso-Chr15 21948975 21953763 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1582 8 631 EF-hand Containing Proteins AT3G44820 46.472 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1582 - - gmx:100794676 1267.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1582 15 21948975 21953763 Gso9g0710 9 10278409 10283188 GST