Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1572 ATGGATTCCCCACCTTCCCAGCACTCGTGGGGAAGGTCACCAACCTCCCTCTCCTCTTCTTCTTCATCTCTCTCCAAATCTAATTCTGATACAATCCAAAGCCTCTCTTCGATTTTGAACAATCCTCACGCCTCCGACGCTGCCTCCTGGGCCGGCTGGTGGTCCTCCTCCGCCTCCGCCGTCTCCGTCCCTGAATTCGCCCCTATCTCCGCCTCCAAGGCCGCCTCCGATGTCTCCCGATCTGACTTCCTCCCCTACCTTTCCCCCATCGCCGACGCCTTCCACCGCTTCGCGGACATCCGGAACCACGCCTCCAACGAACAGATCAATGCCGCCGCCGCCACCTCTGACGCCACCAATTCCGGCAGCGTCGGTCAGGGAAAGGCGCTGGTGGCGTGCCTCCGCGAGGTCCCGGCGCTCTACTTCAAGGAGGACTTCCGCCTCGAGGACGGCGCCACGTTCCGCGCCGCCTGCCCCTTCGCCAACGTCGCCGAGAACCTCGCGCTGCAGGAGAAGCTCTCGCACTACCTGGATGTCGTGGAGCTGCACCTCGTGAAGGAGATCTCGCTCCGGTCCTCATCGTTCTTCGAGGCGCAGGGGCAGCTGCAGGACCTTGATGCTAAGATCCTCCAGGGTTGCGAGCAGATTCGGCGCCTCAAGGACACCATTCGCCTCCTCGATGCCGATTTGGTCCATGATGCGCGCCAGATTCAGGAGCTCAACGGCACCAGGACCAACCTCCTCGCACTCCTGCAGAAACTCAGGCTTATATTTTACGTCAACCAGGCCCTCTCCGCTCTCAAATTGCTTGTTGCGTCTGCAGATTGTGCTGGAGCACTAGATGTGACTGATGATTTGCAACATTTGCTGGATGGAGATGAGCTCTCTGGTCTGCATTGCTTTCGTCATCTTAGAGATCATGTAATAGGCTTTATAGAATCCATAAACAGCATTCTTTCAGCAGAGTTTATTCGAGCTTCCTTACACGATGCTGCTGAAAAAGATGTGATAATTTTATCCAAAGCTAAAGCAAGAGCTTCCCTTCCAATGAATGGAAAGGATGATGAAGTAAAGTTGGAAGAAGAGGAAACCAATAATTTCAAAGATAGTCTTCTTCCTACTGTAATTGGATTGCTCAGAACTGCTAAACTTCCCTCTGTCCTGAGGACTTATCGAGATACACTGACTGCTGATATGAAGAGTGCTATTAAGACTGCTGTTGCTGAGTTGCTTCCGGTTCTTGCTTCTCGAGGTTCAGAGTCAGAATTCTTTTCTGGAGACAGAGCTGTGGATGCAGATGGTGGAGGTGCATCACTTGCTAGCAAGTTGCGGAGCCTATCATCTGACTGTTTTGTGCATCTTCTGAGTGCTATTTTCTTGATAGTACAGGCACATTTAGTGCGGGCTGCTGAAGTGAAAAAGGCCATCGAATGGATCTTAAGCAACCGTGATGGTCATTATGCTGCTGATTCAGTTGTGGCGGCAATTGCTCATGGTGCTGCAGCTGCAGAAACATCCCAAGAAAGCGAGTCTCATGGTACTACATTTTTGCCATATTCAGCACAAAGAAGTGTTGCCAAGGGTTCTTCATTTCAGGGAAAAGCAATTGATTCTATGAGCTCCTCAAACATGTCAAAAAATTTCAGAGCTGATATATTGCGAGAAAACGCAGAAGCTGTCTTTGCGGCATGTGATGCTGCTCATGGAAGATGGGCAAAGCTTCTTGGGGTCCGTGCAATTCTTCATCCTAGGTTGAAATTGCTGGAGTTTCTAACCATATACAACATTACCCAGGAGTTCATTACTGCTACAGAAAAAATTGGTGGGAGGTTGGGATACAGCATCCGTGGGACACTGCAATCACAGGCCAAGGCTTTTGTTGATTTTCAGCATGAATCTCGGATGTCAAAGATTAAGGCAGTGCTTGACCAGGAAACCTGGGTGGAGATTGATGTTCCTGATGAATTTCAATCCATTATCAGTTTGCTTTTTACATCTGATAATTTGACTTCTGAGAACCTTAATGAAACCGAGGATGATATTTCTACCAGTTACAATTGTGTGGTGACTAACAATGATGTTCTGCCGATGGCAGACAGTTCAGAGTCAACTGCTGAACAGCAAATTATGCAGTCTAATTCCATTGAATCATCGATGAATAATGAAACACCAGATAGATCTAAATCCCCGGTTGATTCAACGGAACCAAATAAAGCTCATGGTAGGATTTCATCAGCACATAGTAACAATACTGAGAAAGACCATAAAAAATCTACATCTCAGGCTCTTTATTACAAAGGTGTTGGTTATCACATGGTAAACTGTGGCTTAATATTGTTGAAGATGTTGTCGGAGTACATTGATATGAACAACCTTTTGCCAACACTATCCTCAGAAGTTGTTCACCGTATAGTAGAAATCTTGAAGTTTTTCAACACAAGAACATGCCAACTTGTGCTTGGGGCTGGTGCTATGCAGGTGTCTGGTTTGAAGTCCATCACGTCTAAACACCTGGCATTGGCAAGTCAAGTCATTAGTTTTGTACATGCTATTATTCCTGAAATTCGGCAGATTCTTTTTCTTAAAGTACCCGAGACTAGAAAAACACTATTGCTTTCTGAGATCGATCGGGTTGCTCAGGATTATAAAGTCCACAGAGATGAAATACATAGCAAATTAGTTCAAATAATGCGAGAAAGATTACTGGTACATTTACGTGGGTTGCCTCAAATTGTTGAGAGTTGGAATAGACCCGAGGATGCTGACCCTCAGCCTAGTCAATTTGCTCGGTCCCTTACAAAGGAAGTTGGATACCTCCAACGTGTTCTATCTCGAACTTTGAATGAAGATGATGTTCAAGCAATTTTCAGCCAAGTGGTTGTTATATTTCACTCACAAATTTCCGAAGCATTTTCAAGATTTGATATAAGCACTCCTCAAGCACAGAATAGGCTATATCGGGATGTCAAACATATTCTTCAATGCATACGATCATTGCCATTGGGTGATTTGAGTAAATCTGATACCCCAAACTGGGGTCAGCTGGATGAATTCTTGGTGAAAAGATTTGGAAATGATGCTGCTCAGTAA 3090 0.4638 MDSPPSQHSWGRSPTSLSSSSSSLSKSNSDTIQSLSSILNNPHASDAASWAGWWSSSASAVSVPEFAPISASKAASDVSRSDFLPYLSPIADAFHRFADIRNHASNEQINAAAATSDATNSGSVGQGKALVACLREVPALYFKEDFRLEDGATFRAACPFANVAENLALQEKLSHYLDVVELHLVKEISLRSSSFFEAQGQLQDLDAKILQGCEQIRRLKDTIRLLDADLVHDARQIQELNGTRTNLLALLQKLRLIFYVNQALSALKLLVASADCAGALDVTDDLQHLLDGDELSGLHCFRHLRDHVIGFIESINSILSAEFIRASLHDAAEKDVIILSKAKARASLPMNGKDDEVKLEEEETNNFKDSLLPTVIGLLRTAKLPSVLRTYRDTLTADMKSAIKTAVAELLPVLASRGSESEFFSGDRAVDADGGGASLASKLRSLSSDCFVHLLSAIFLIVQAHLVRAAEVKKAIEWILSNRDGHYAADSVVAAIAHGAAAAETSQESESHGTTFLPYSAQRSVAKGSSFQGKAIDSMSSSNMSKNFRADILRENAEAVFAACDAAHGRWAKLLGVRAILHPRLKLLEFLTIYNITQEFITATEKIGGRLGYSIRGTLQSQAKAFVDFQHESRMSKIKAVLDQETWVEIDVPDEFQSIISLLFTSDNLTSENLNETEDDISTSYNCVVTNNDVLPMADSSESTAEQQIMQSNSIESSMNNETPDRSKSPVDSTEPNKAHGRISSAHSNNTEKDHKKSTSQALYYKGVGYHMVNCGLILLKMLSEYIDMNNLLPTLSSEVVHRIVEILKFFNTRTCQLVLGAGAMQVSGLKSITSKHLALASQVISFVHAIIPEIRQILFLKVPETRKTLLLSEIDRVAQDYKVHRDEIHSKLVQIMRERLLVHLRGLPQIVESWNRPEDADPQPSQFARSLTKEVGYLQRVLSRTLNEDDVQAIFSQVVVIFHSQISEAFSRFDISTPQAQNRLYRDVKHILQCIRSLPLGDLSKSDTPNWGQLDEFLVKRFGNDAAQ* 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1572 1029 Pfam Vps54-like protein 770 900 IPR012501 GO:0042147
Gso15g1572 1029 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 54, CHLOROPLASTIC 1 1028 - -
Gso15g1572 1029 MobiDBLite consensus disorder prediction 714 757 - -
Gso15g1572 1029 Gene3D - 868 907 - -
Gso15g1572 1029 PANTHER VACUOLAR PROTEIN SORTING 54 1 1028 IPR039745 GO:0000938|GO:0042147
Gso15g1572 1029 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1572 Gso-Chr15 21654591 21687216 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1572 K17600 - gmx:100804432 1884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1572 15 21654591 21687216 Gso9g0699 9 9904427 9969437 GST