Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1566 ATGGCCTCAGAAAATGGAGAGAAAGTGGAGATAGGTTTGAATGCAGTTCCTCAAGAGACACATAAGCCAAAGAAGGATTGGGTTCTTTTGTCCCTCAGAATGGTTGCATTTTTTGCCACTGCTTCTGCCACACTTGTGATGACTTTTAACAAACAAACCAAAAGCTTCGTAGTTGCCACCGTCGGTAGCACTCCAATAACAGCCACTCTTGCTGCAAAGTTTAACCAAACTCCAGCTTTTGTGTTCTTTGTGATAGCCAATGGAAATGCCAGTCTGCATAACTTGGTGATGATAGTAATGGAAGTATTAGGACCCCGATATGATTACAAAGGACTCCGGCTTGCACTAATTGCAATATTAGATATGATGACTATGGCTCTGGCTTCAGCTGGGGATGGTGCAGCAACATTCATGTCTGAATTGGGAAAGAATGGTAATTCACACGCAAGGTGGGATAAGATCTGTGACAAGTTTGAAACCTATTGCAACCGAGGTGGTGCTGCCCTTATTGTCTCTTTCGTTGGCTTCATTCTCCTCCTCATTATTTCAGTGATGTCGGTTATCAAGCTGCTCAAGTCAAATCGCATTAACCACGCTTCTCCATAA 606 0.4323 MASENGEKVEIGLNAVPQETHKPKKDWVLLSLRMVAFFATASATLVMTFNKQTKSFVVATVGSTPITATLAAKFNQTPAFVFFVIANGNASLHNLVMIVMEVLGPRYDYKGLRLALIAILDMMTMALASAGDGAATFMSELGKNGNSHARWDKICDKFETYCNRGGAALIVSFVGFILLLIISVMSVIKLLKSNRINHASP* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1566 201 PANTHER CASP-LIKE PROTEIN 1B2 20 194 - -
Gso15g1566 201 Pfam Casparian strip membrane protein domain 24 178 IPR006702 -
Gso15g1566 201 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 20 194 - -
Gso15g1566 201 TIGRFAM A_tha_TIGR01569: plant integral membrane protein TIGR01569 30 189 IPR006459 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1566 Gso-Chr15 21555972 21557511 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1566 - - gmx:100792043 387.497