Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1546 ATGGCTCCAATACGCTCCACTGGATTTGTTGATCCTGGTTGGGATCATGGCATTGCTCAAGATGAGCGGAAAAAGAAGGTTAGATGCAATTACTGTGGGAAAATAGTTAGTGGTGGGATATACAGATTAAAGCAGCATTTAGCCCGAGTTTCTGGTGAAGTAACATACTGTGAAAAGGCTCCTGATGAAGTCTACCTGAAAATGAAAGAAAATCTTGAAGGCTGCCGTTCCCATAAGAAACAAAAACAAGTTGACACACAAGCATATATGAATTTTCACTCTAATGATGATGAAGATGAAGAAGAGCAAGTTGGGTGTAGAAGCAAAGGGAAGCAATTGATGGATGATCGAAATGTATCTGTAAATTTGACTCCTCTTCGCTCCTTAGGATATGTTGACCCAGGGTGGGAGCATGGTGTTGCTCAGGACGAGAGAAAGAAGAAAGTCAAATGCAATTACTGTGAGAAAATTGTCAGTGGAGGTATTAATCGGTTTAAACAACATTTGGCTAGAATTCCTGGAGAGGTAGCACCTTGTAAAAGTGCTCCAGAAGATGTTTATCTGAAAATAAAAGAGAACATGAAATGGCATCGTACTGGGAGGAGACTTAGGAGGCCTGAGATTAAGGAATTGATGCCTTTCTATGCAAAGTCCGATAATGATGATGATGAGTGTGAGCTAGTAGAAGATTTGCATCATATGAACAAGGAAACTTTGATGGATGTTGATAAGAGATTCTCTAAAGATATAATGAAGACCTACAAGGGAGTGTCACATAGTACTGGTCCTGAACCAGTATTGAGAAGATCAAGATTGGATAATGTTTACCTGAAACTACCCAAGAATCAGACTCCTCAAGCTTACAAACAAGTAAAAGTTAAGACAGGGCCCACTAAGAAATTACGCAAGGAAGTTATTTCTTCAATTTGCAAGTTCTTTTACCATGCAGGGATTCCTATACAGGCTGCAGACTCCCTATATTTTCATAAAATGCTGGAAGTGGTTGGTCAATATGGACAAGGACTGGTGTGCCCAGCAAGCCAACTTATGTCTGGTCGCTTTTTGCAGGAGGAAATCAATTCTATTAAAAATTACCTTGTTGAATATAAGGCTTCCTGGGCAATCACTGGTTGCTCTATAATGGCAGATAGTTGGATAGATACACAGGGTAGGACAATTATTAACTTTCTTGTTTCTTGTCCTCATGGTGTATACTTTGTTTCTTCGGTTGATGCCACTAATGTAGTGGAAGATGCACCAAATTTATTCAAGCTTCTGGACAAAATAGTGGAAGAAGTAGGTGAGGAAAATGTAGTGCAGGTAATCACTGAAAATACTCCCAACTATAAGGCTGCTGGAAAAATGCTTGAAGAGAAGAGAAGGAATTTATTCTGGACCCCTAGTGCCACTTATTGTATTAATTGTATGCTTGAAGATTTTATGAAAATAAGATGTGTGGAAGAGTGCATGGAAAAGGGCCAGAAAATTACCAAACTAATATACAATCAAATATGGTTGTTAAATCTTATGAAAAGTGAATTTACCCGGGGCCAGGAGCTTCTAAAACCAGCTGCCACCCAGTTTGCCTCTAGCTTTGCTACACTACTGAGCTTGCTGGATCATCGAGTTGCTCTCAGAAGAATGTTTCTTTCCAACAAATGGATTTCATCCAGATTTTCCAGCTCAAATGAGGGGAAAGAGGTGGAAAAAATAGTTTTGAATGTCACATTTTGGAAGAAGATTCAGCATGTTAGGAAGTCAATAGATCCCATAATGCAAGTACTTCAAAAGCTTTATAGTGGTGAGAGCTTGTCAATGCCATATCTATATAACGATATGTACAGGGCAAAACTTGCAATCAAATCTGTTCATGGTGACGATGCACGTAAATATGAACCATTCTGGAAGGTCATAGACAGTCATTGGAATTCTCTGTTCTGTCACCCTCTTTACTTGGCTGCATACTTCTTAAATCCATCATACCGATATCGTCAGGATTTTGTGGCGCATTCTGAGGTAGTACGAGGACTCAATGAATGCATTGTCCGGCTGGAGCCTGATAATATGAGACGGATATCCGCATCAATGCAGATTGCTCATTATAATGCTGCACAAGACGACTTTGGAACTGAATTGGCAATTAGCACAAGAACAGGTCTAGAACCTGCTGCTTGGTGGCAACAGCACGGAATAAGTTGCTTAGAGTTGCAAAGAATAAGTGTACGCATATTAAGTCAAACATGCTCGTCCTTTGCATGTGAGCATGATTGGAGTATATATGATCAGATACGTTGCAAAAGACAAAATCGTCTATCTCAGAAGAAATTGAATGACATTATATATGTCCACTACAACTTGCGACTTAGAGAATGCCAATTAAGAAAAAGGTCCAGGGACTCGAAGTTGTCCTCTGTTGACAGTGTTCTGCAAGAGCATTTACTCGATGATTGGATAGTAGATACTAATGTGCAAAACTTTGATGTTGATAAGAATTTCCTATTTGGAGTTGAACTAGATGATGAATATGAAAACGATTCAATTGATTATGAAGATGGAGCTGCAAGGCATCTAAAGGGATCCCTTGAGCTGGTGACTATGGCTGATGTAGCAGTAGGATCACCAGATGTAGATCATGCTAACATTGATGCTGACACTGATGATGAGTCTGATCTGAATTATTTTGATGATGATTTGAGCGAGTAA 2703 0.3947 MAPIRSTGFVDPGWDHGIAQDERKKKVRCNYCGKIVSGGIYRLKQHLARVSGEVTYCEKAPDEVYLKMKENLEGCRSHKKQKQVDTQAYMNFHSNDDEDEEEQVGCRSKGKQLMDDRNVSVNLTPLRSLGYVDPGWEHGVAQDERKKKVKCNYCEKIVSGGINRFKQHLARIPGEVAPCKSAPEDVYLKIKENMKWHRTGRRLRRPEIKELMPFYAKSDNDDDECELVEDLHHMNKETLMDVDKRFSKDIMKTYKGVSHSTGPEPVLRRSRLDNVYLKLPKNQTPQAYKQVKVKTGPTKKLRKEVISSICKFFYHAGIPIQAADSLYFHKMLEVVGQYGQGLVCPASQLMSGRFLQEEINSIKNYLVEYKASWAITGCSIMADSWIDTQGRTIINFLVSCPHGVYFVSSVDATNVVEDAPNLFKLLDKIVEEVGEENVVQVITENTPNYKAAGKMLEEKRRNLFWTPSATYCINCMLEDFMKIRCVEECMEKGQKITKLIYNQIWLLNLMKSEFTRGQELLKPAATQFASSFATLLSLLDHRVALRRMFLSNKWISSRFSSSNEGKEVEKIVLNVTFWKKIQHVRKSIDPIMQVLQKLYSGESLSMPYLYNDMYRAKLAIKSVHGDDARKYEPFWKVIDSHWNSLFCHPLYLAAYFLNPSYRYRQDFVAHSEVVRGLNECIVRLEPDNMRRISASMQIAHYNAAQDDFGTELAISTRTGLEPAAWWQQHGISCLELQRISVRILSQTCSSFACEHDWSIYDQIRCKRQNRLSQKKLNDIIYVHYNLRLRECQLRKRSRDSKLSSVDSVLQEHLLDDWIVDTNVQNFDVDKNFLFGVELDDEYENDSIDYEDGAARHLKGSLELVTMADVAVGSPDVDHANIDADTDDESDLNYFDDDLSE* 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1546 900 PANTHER HAT DIMERIZATION DOMAIN-CONTAINING PROTEIN 11 48 - -
Gso15g1546 900 PANTHER HAT DIMERIZATION DOMAIN-CONTAINING PROTEIN 45 838 - -
Gso15g1546 900 Pfam hAT family C-terminal dimerisation region 715 786 IPR008906 GO:0046983
Gso15g1546 900 SUPERFAMILY Ribonuclease H-like 370 788 IPR012337 -
Gso15g1546 900 ProSiteProfiles Zinc finger BED-type profile. 130 186 IPR003656 GO:0003677
Gso15g1546 900 Pfam BED zinc finger 136 171 IPR003656 GO:0003677
Gso15g1546 900 Pfam BED zinc finger 14 49 IPR003656 GO:0003677
Gso15g1546 900 ProSiteProfiles Zinc finger BED-type profile. 8 64 IPR003656 GO:0003677
Gso15g1546 900 PANTHER OSJNBA0013A04.12 PROTEIN 11 48 - -
Gso15g1546 900 PANTHER OSJNBA0013A04.12 PROTEIN 45 838 - -
Gso15g1546 900 Pfam Protein of unknown function (DUF 659) 345 496 IPR007021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1546 Gso-Chr15 19630677 19636989 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1546 - - gmx:100784818 1817.36