Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1509 ATGGCAAAGCAAAATTTTCCTATGGATTGCTCCTTTGTCTGCATAACCTTAATCCAGTTCATTGCTTCAATGAGTTTCAGCAAATCCCAGAGCCTCATAAACGAAACTAATACCAGCACAACTACCACTACTACTAAGGCCTTTTTCATATTAGGTGACTCTACTGTAGATTCTGGCAACAACAACTACATAAACACTATTCCTGAGAACAAAGCAGATTACAAGCCATATGGACAAAATGGTTTTTTTCAAGAACCCACTGGACGATTCTCAGATGGCCGTGTCATTGTAGATTTCATAGCTGAATATGCTAATCTGCCACTAATTCCTCCGTTTTTACAACCAAATGCTGATTATAGTAACGGTGCCAACTTTGCTTCTGGTGGGGCCGGTGTTCTTGTTGAAACCAATCAGGGACTGGTGATTGACCTTCAAACACAATTAAGTCACTTTGAAGAAGTGAGAATATTATTATCAGAAAAGCTTGGAGAGAAGAAGGCAAAGGAATTGATCTCAGAAGCAATTTATTTCTTTAGCATAGGAAGCAACGATTACATGGGTGGTTATCTAGGTAACCCGAAAATGCAAGAAAGCTACAATCCTGAACAATATATTAGAATGGTCATTGGAAACTTGACACAGGCAATCCAAACTCTATATGAGAAAGGGGCTAGAAAGTTTGGGTTCTTAAGTTTGTCTCCTTTGGGTTGTTTGCCAGCTCTTAGAGCTTTAAACCCGGAAGCCAACAAAGATGGTTGTTTTGAAGCAGCTTCTGCTCTTGCTCTAGCACATAATAATGCTTTGAGTAATGTCCTCACAAGCCTCGAGCATGTCCTTGAAGGATTCATGTACTCTAACTCTAATTTCTATGATTGGCTTCGAGAAAGAATAGATGACCCCCCAAATTATGGTTTTAACGATGGAGTTAATGCTTGCTGTGGAAGTGGACCTTATGGGGGTGTCTTCACTTGTGGGGGTACAAAGAAAATTAAAGAGTTCAGTTTATGTGACAATGTTGGCGATTTTGTATGGTGGGATTCTTTTCACCCAACAGAGAAGATCCATGAGCAATTCGCTAAGGCGTTATGGAATGGACCAGCTTCCTCGGTAGGGCCATACAATTTAGAAAACTTCTTCAACAAAGAGATCAAGCTCACTATTGCTGATGTAGTTGATGCCCCAGAAATTCACCATGGAGAATTTCACTACTGA 1212 0.4018 MAKQNFPMDCSFVCITLIQFIASMSFSKSQSLINETNTSTTTTTTKAFFILGDSTVDSGNNNYINTIPENKADYKPYGQNGFFQEPTGRFSDGRVIVDFIAEYANLPLIPPFLQPNADYSNGANFASGGAGVLVETNQGLVIDLQTQLSHFEEVRILLSEKLGEKKAKELISEAIYFFSIGSNDYMGGYLGNPKMQESYNPEQYIRMVIGNLTQAIQTLYEKGARKFGFLSLSPLGCLPALRALNPEANKDGCFEAASALALAHNNALSNVLTSLEHVLEGFMYSNSNFYDWLRERIDDPPNYGFNDGVNACCGSGPYGGVFTCGGTKKIKEFSLCDNVGDFVWWDSFHPTEKIHEQFAKALWNGPASSVGPYNLENFFNKEIKLTIADVVDAPEIHHGEFHY* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1509 403 SUPERFAMILY SGNH hydrolase 48 365 - -
Gso15g1509 403 CDD SGNH_plant_lipase_like 47 366 IPR035669 -
Gso15g1509 403 Gene3D SGNH hydrolase 34 367 IPR036514 -
Gso15g1509 403 Pfam GDSL-like Lipase/Acylhydrolase 49 361 IPR001087 GO:0016788
Gso15g1509 403 PANTHER - 40 388 - -
Gso15g1509 403 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 40 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1509 Gso-Chr15 18076217 18078666 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1509 47 380 Acyl Lipid Metabolism Gene Families AT4G10950 31.014 8.39e-56 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1509 - - gmx:100801228 803.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1509 15 18076217 18078666 Gso9g0627 9 7781542 7784083 GST