Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1500 ATGAGAACGTCGTCGTTTCGGAGATGCAGCACCGGCGAGTTTGATTTGCAGGAAAATTTTGATGCCTCGTCGCCGGTGACCGGAGGACACGCATATGGTGCTATGTTGCCGGTGTTCCTCAACGAGCTGAGGAGTAATCATCACAAGGAACTTGTGGAGATCACGCTGGAGCTTGAAAACGACGCCGTTGTGCTATGCAACGTGGCGCCGGCGCCATCTTCGGCTCCGAACGCTTCGCCGTCGTCGAGCACCACCGGAGGCGACGGAAACGGCGGGGGAGGTGGCGGAGGCGTAGCGCGGAGCCTTTCGATTACGTCGAGGATTCGGAGGAAGTTTCCGTGGCTACGTTCGATGTCGTCGGCGTCGGCGGAGAGTGTCACTGCCGCCTCTGCCGCAGTGGAGGATCCTCTGGTGACGGCGCGAAACGCGCGGAAAATGAGAGTGAAGCTTGAGCGGACGAGGTCGAGCGCGCAGAGAGCTTTGAAAGGGTTGAGATTCATCAGCAAGTCCGGCGAGGCCACGGAGGAGCTGTGGCGGAAGGTGGAAGAAAGGTTCAACGTGTTGGCCAAGGATGGCTTACTCGCTCGTGAAGACTTTGGTGAATGCATAGGAATGGAGGATTCGAAGGAATTTGCAGTGTGTATATTCGACGCATTGGTTCGAAGGAAGGAAAGGAGAGTGAGCAGCATAAACAGAGAAGAGTTGCATGAGTTCTGGTTGCAAATTTCAGATCAGAGCTTTGATGCTCGGCTTCAGATTTTCTTTGACATGGCAGATAGTAATGAAGACGGAAGAATTACTAGGGAGGAAGTACAAGAGCTCATAATGCTCAGTGCTTCCGCAAACAAGCTATCGAAGCTAAAAGAACAAGCTGAAGGATACGCCGCGTTAATAATGGAAGAATTAGACCCAGAAAACCTGGGTTATATCGAGCTGTGGCAGCTAGAAATGTTGTTGCTAGAAAAGGATAGGTACATGAACTACAGCAGACAACTCAGCACCGCAAGTGTGAATTGGAGTCAAAATATGACTGATTTGAGGCCCAAAAATGAGATACAAAGATTCTGCAGAACCCTTCAATGTCTTGCATTAGAGTATTGGAGAAGGGGCTGGATTTTGTTACTGTGGTTGGTTACCACTGCTTTCCTATTTGCCTGGAAATTTTACCAGTATAGAAACAGATCAACTTTCCAAGTGATGAGCTACTGCATACCAATAGCTAAAGGTGCTGCAGAGACACTGAAGCTCAACATGGCTCTTATTCTCTTACCAGTTTGTAGGAACACATTGACATGGCTTCGTTCCACAGGAGCCAGGAAATTTGTCCCTTTTGATGACAACATTAATTTCCACAAGATCATTGCATTCGCCATAGCAGTTGGAATCGCCGTTCATGCAGGCAATCATCTGGCATGTGATTTCCCCCTCCTCGTAAACTCATCTCCAGAAAAATTTTCACTTATATCTTCAGATTTCCACAACAAAAGACCCACATACAAATCCCTTCTGACCGGCGTCGAAGGCGTAACCGGAATCTCAATGGTTGTTTTGATGGCTATCTCTTTCACTTTGGCCACTCACCACTTCCGGAGAAACGCACTCAGGCTTCCTTCACCCTTCAACAGATTGACAGGTTTCAATGCGTTCTGGTACTCTCACCACCTCTTTGGTCTGGTCTATGTTCTGCTTCTCGTCCATGGAACGTTCTTGTATTTGACCCATCGGTGGTACCAGAAAACGACGTGGATGTATATCTCTGTTCCACTGTTGCTGTACCTTGCTGAGCGTACTCTACGCACTCGTAGATCAGCACATTATACAGTAAAAATTCTGAAGGTTTCAGGACTACCGGGAAATGTATTCAGCTTACTGATGTCCAAGCCTAATGGATTTAAGTACAAAAGTGGACAATACATATTTTTACAATGCCCAAAAATCTCTCCGTTTGAATGGCACCCATTCTCCATTACCTCAGCCCCAGGAGATGACTGCCTAAGTGTTCACATTCGCACAGTAGGAGACTGGACCCAAGAACTTAAGCATCTTCTCACAAAAGAAGATGACAAATTACCTTCAGTTAATTGTCATGCAAAGTTTGGTGAACTAATGCAACTGGATCAAAGAGGACAGCCGAGACTGCTTGTTGATGGCCCTTATGGAGCTCCAGCACAAGACTACCAGAATTTTGATGTACTACTTCTCATAGGATTAGGAATTGGAGCAACTCCTTTCATCAGCATTCTCAGAGATCTTCTCAATAACACCAGAGCAATGGATGAACTAGTGGTGCAGGAGTCAAACACAGAAACAAGTCAAACAACCAGATCAGATGAGAGCTCCAATAGCTTTACATCTTCAAATGTAACTCCAGGAGGAAGCAAGAGATCACGAAGGACTACGAATGCTTATTTCTACTGGGTCACTAGGGAACCTGGATCTTTTGAATGGTTTAAAGGAGTAATGGACGAAGTTGCAGAAATGGACCACAAAGGTCAAATCGAGCTTCATAACTATCTTACAAGTGTCTATGAAGAGGGGGATGCGAGATCAACCTTAATAACCATGATCCAAGCACTGAACCATGCGAAACATGGTGTTGACATTCTGTCAGGCACTCGAGTAAGGACACACTTTGCCAGGCCTAATTGGAAAGAAGTTTTCACCAAGATTGCCTCTAAACATCCGTTTTCTACAGTAGGGGTGTTCTATTGCGGGATGCCAGTATTAGCGAAAGAGCTAAAGAAGCTATCACTTGAGCTGAGCCACAAGACAACTACACGCTTCGAGTTTCACAAGGAGTACTTTTGA 2808 0.4655 MRTSSFRRCSTGEFDLQENFDASSPVTGGHAYGAMLPVFLNELRSNHHKELVEITLELENDAVVLCNVAPAPSSAPNASPSSSTTGGDGNGGGGGGGVARSLSITSRIRRKFPWLRSMSSASAESVTAASAAVEDPLVTARNARKMRVKLERTRSSAQRALKGLRFISKSGEATEELWRKVEERFNVLAKDGLLAREDFGECIGMEDSKEFAVCIFDALVRRKERRVSSINREELHEFWLQISDQSFDARLQIFFDMADSNEDGRITREEVQELIMLSASANKLSKLKEQAEGYAALIMEELDPENLGYIELWQLEMLLLEKDRYMNYSRQLSTASVNWSQNMTDLRPKNEIQRFCRTLQCLALEYWRRGWILLLWLVTTAFLFAWKFYQYRNRSTFQVMSYCIPIAKGAAETLKLNMALILLPVCRNTLTWLRSTGARKFVPFDDNINFHKIIAFAIAVGIAVHAGNHLACDFPLLVNSSPEKFSLISSDFHNKRPTYKSLLTGVEGVTGISMVVLMAISFTLATHHFRRNALRLPSPFNRLTGFNAFWYSHHLFGLVYVLLLVHGTFLYLTHRWYQKTTWMYISVPLLLYLAERTLRTRRSAHYTVKILKVSGLPGNVFSLLMSKPNGFKYKSGQYIFLQCPKISPFEWHPFSITSAPGDDCLSVHIRTVGDWTQELKHLLTKEDDKLPSVNCHAKFGELMQLDQRGQPRLLVDGPYGAPAQDYQNFDVLLLIGLGIGATPFISILRDLLNNTRAMDELVVQESNTETSQTTRSDESSNSFTSSNVTPGGSKRSRRTTNAYFYWVTREPGSFEWFKGVMDEVAEMDHKGQIELHNYLTSVYEEGDARSTLITMIQALNHAKHGVDILSGTRVRTHFARPNWKEVFTKIASKHPFSTVGVFYCGMPVLAKELKKLSLELSHKTTTRFEFHKEYF* 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1500 935 PRINTS Cytochrome B-245 heavy chain signature 454 472 IPR000778 GO:0016020|GO:0016491
Gso15g1500 935 PRINTS Cytochrome B-245 heavy chain signature 546 566 IPR000778 GO:0016020|GO:0016491
Gso15g1500 935 PRINTS Cytochrome B-245 heavy chain signature 711 724 IPR000778 GO:0016020|GO:0016491
Gso15g1500 935 PRINTS Cytochrome B-245 heavy chain signature 734 751 IPR000778 GO:0016020|GO:0016491
Gso15g1500 935 ProSitePatterns EF-hand calcium-binding domain. 259 271 IPR018247 -
Gso15g1500 935 SUPERFAMILY Riboflavin synthase domain-like 606 722 IPR017938 -
Gso15g1500 935 CDD EFh 229 276 IPR002048 GO:0005509
Gso15g1500 935 Pfam Ferric reductase like transmembrane component 409 564 IPR013130 -
Gso15g1500 935 ProSiteProfiles EF-hand calcium-binding domain profile. 246 281 IPR002048 GO:0005509
Gso15g1500 935 MobiDBLite consensus disorder prediction 71 100 - -
Gso15g1500 935 MobiDBLite consensus disorder prediction 764 796 - -
Gso15g1500 935 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 603 725 IPR017927 GO:0016491
Gso15g1500 935 PANTHER NADPH OXIDASE 40 935 - -
Gso15g1500 935 SUPERFAMILY EF-hand 166 331 IPR011992 -
Gso15g1500 935 MobiDBLite consensus disorder prediction 72 89 - -
Gso15g1500 935 Pfam FAD-binding domain 607 722 IPR013112 GO:0016491
Gso15g1500 935 Pfam Respiratory burst NADPH oxidase 149 249 IPR013623 GO:0004601|GO:0050664
Gso15g1500 935 Gene3D - 150 267 - -
Gso15g1500 935 Coils Coil 140 160 - -
Gso15g1500 935 SFLD NADPH oxidase subgroup (NOX) 145 935 - -
Gso15g1500 935 PANTHER RESPIRATORY BURST OXIDASE HOMOLOG PROTEIN E 40 935 - -
Gso15g1500 935 Pfam Ferric reductase NAD binding domain 729 917 IPR013121 GO:0016491
Gso15g1500 935 Gene3D Translation factors 593 691 - -
Gso15g1500 935 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 728 935 IPR039261 -
Gso15g1500 935 CDD NOX_Duox_like_FAD_NADP 610 887 - -
Gso15g1500 935 Gene3D - 720 935 IPR039261 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1500 Gso-Chr15 17820135 17835354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1500 23 935 Miscellaneous Gene Families AT1G19230 62.671 0.0 1171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1500 K13447 - gmx:100796455 1785.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1500 15 17820135 17835354 Gso9g0621 9 7589861 7601153 GST