Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1469 ATGGTTCCCATGGCCGGCACCACCGCCACCGGCAGTAGAAAAATCGAAACATACGAAGAGTTTGAGAAAGTTCACGCGCTGCTCCTCGCGGCGTCGGGGCTACCGGAGCGGCTACACCGGCGCCTCTTCGAGAAGCTCTCCTGCGAGCACTTTGACGGAGGCGATCACTTCCAGATCGAGCCGTGCGAGGAGGGCCGCCAGAGGCGCCTCGTCCTCACGTCGGCGTCCATGCCGCGGGACTCCGACGTCTTCCTCGTCGACCACGCGTGGACCTTCAGACTCTCCGACGCCTACACGCAGCTAAGTAAGGTTCCGGGGTTGGCTGAGAGGATGGGGTCTTTGATGTGTGTGGATGTTGATGTCGATGTGAGTTTGGATGCTGAAGATGAAGCTGAAGTGAATGATGAACGTGATGTTGTGGAAACTTTGGAGAGTGAAGTTCGAGAGGCGAAGGAGAATGGAGATGGCACGTTGAGGTGGTTGGAGCTTGAGGGGCTTCACATTGATGATGATATGCTTGTGTCTCTCGCCTTATCAACTAGGTTTCCGGAGTTAGTGGCACTTAGCCTTCTTGGAAACAAGCTCAATAGTGCTGAAGTGGTTTTTCAAGAACTTATCAAACTTAAGCATCTTAAAGGAATCTGGCTCAACAATAACCCTGTTCTTAAAAATTGTGATGGTGAGCTTGAACAGGTGATTCTTAAGGAGTTGCCAGAACTGGAAATTTATAATTCAAGTTTAACGGGCAATTTTGGGGAGTGGGCCTTGGGCTTTTGTGCAGGGTTATATGGAAAGGATAATCCTGGAAATGCTGATCAGACTGATACTCTGCTGCACACTGTGTCTACTCTGGACCTTTCAAATAGAAACATTCACAATTTAATCAAGAAGGCATTTTCACCCATTTGTTTGCCATCTCTTTCTTACTTGAATATTCGAGGAAATCCATTGGAGCAAAACTCAGTTGGTGACTTGTTAGATCTGCTGAGGAGATTCCCTTGCTTGCGTTCATTGGAGGTGGATATTCCTGGTCCGCTTGGAGGAAGTGCCATTGAAATTCTGGAATCTCTTCCAAACATTTCTGAGCTAAATGGTATCAGTGCATCCAAAATATTGGAAACTGGAAAGCATATTATTGATTCAATGCTTCTTCCTCGTCTTCCTGAATGGACTCCTGATGAGCCTCTTGCTGATCGTATTATAAATGCGATGTGGCAATATCTAATGACATATAGACTTGCAGATGAAGAAAAGTTAGATGAAACATCTGTATGGTATGTGATGGATGAGCTAGGTTCAGCTTTGCGGCATAGTGATGAGCCAAATTTCAGAGTGGCACCATTTCTGTTCATGCCAGAGGGCAATCTAGCATCAGCTGTGAGCTTTTCTATTCTATGGCCAACACAGAATGTTTGTAAAGGTGATGAGTGCACACGTGATTTTCTTCTTGGTATTGGGGAGGATAAACAACGTTCTGCCAGGCTTACAGCCTGGTTCCACACTCCAGAGAACTATTTTATCCATGCATATGAAAAGCACCATCAGAAATTGTTGTCCACAAGTTTAATGCTGCCCACCTTTCAGTCTTCTGAGACTAGAAGCATTCATCAACCTGGTGGGCGTCCATTACGTGTTTACACAGATATACCTCATGTAGAGGAATACTTGACTCATCCGAAGTTTGCAATCACAAAGGAACCAAAAGATGCAGATATAATATGGACAAGTGTGCAGGTAGATGAGGATATGAAGAAGGCCACAGGAATTACAGATCAACAATACATCAATCAATTTCCTTTTGAGGCATGTCTTGTTATGAAGCATCATTTAGCAGAGACAATTCAGAAGGCACATGGATCTCCTCAATGGTTGCAGCCTACTTATAATCTTGAAACACACCTATCTCAGCTTATTGGTGACTATTGTGTACGCAAAAAGGAAGGACTAGACAATCTCTGGATCTTAAAACCCTGGAACATGGCCCGAACTATTGATACTACTGTAACCGATAATTTGCCTGCAATAATCCGGCTCATGGAAACTGGTCCCAAGATTTGCCAGAAGTATATTGAACAACCTGCTTTGTTCCAGGGGAGAAAGTTTGATCTCCGTTACATATTACTGGTTCGGAGCATGCACCCTCTGGAGATATTCCTGTCAGATTGTTTCTGGGTTAGGATTGCCAACAACCAATATTCTTTGGACAGAAGTAGTTTGTTTGAATACGAAACTCACTTCACTGTTATGAACTATCGTGGAGCAATAAATCATAAGAATGCTAGCGATTTTGTGAGGGAATTTGAGGAAGAACATCAAGTTAAATGGTTGGATATACACACAAGAGTAAGGAAAATAATTCGATCAGTGTTTGAGGCAGCTGCTGTTACTCATCCTGAGATGCATAGTCCAACATCACGGGCAATGTACGGTGTAGATGTCATGTTGGACAGCTCTTTTCAACCCAAGTTACTAGAGGTGACTTACTGCCCGGATTGTACAAGAGCTTGCAAATATGACATGGATATTGTGGTTGGCGAGGGAGGCGTTGCCAAAGCTAGTGATTTCTTCAACAATGTGTTTAGGTGTCTCTTTTTGAATGAAATTTCACAGGTTAGCCCATTGTAA 2625 0.4427 MVPMAGTTATGSRKIETYEEFEKVHALLLAASGLPERLHRRLFEKLSCEHFDGGDHFQIEPCEEGRQRRLVLTSASMPRDSDVFLVDHAWTFRLSDAYTQLSKVPGLAERMGSLMCVDVDVDVSLDAEDEAEVNDERDVVETLESEVREAKENGDGTLRWLELEGLHIDDDMLVSLALSTRFPELVALSLLGNKLNSAEVVFQELIKLKHLKGIWLNNNPVLKNCDGELEQVILKELPELEIYNSSLTGNFGEWALGFCAGLYGKDNPGNADQTDTLLHTVSTLDLSNRNIHNLIKKAFSPICLPSLSYLNIRGNPLEQNSVGDLLDLLRRFPCLRSLEVDIPGPLGGSAIEILESLPNISELNGISASKILETGKHIIDSMLLPRLPEWTPDEPLADRIINAMWQYLMTYRLADEEKLDETSVWYVMDELGSALRHSDEPNFRVAPFLFMPEGNLASAVSFSILWPTQNVCKGDECTRDFLLGIGEDKQRSARLTAWFHTPENYFIHAYEKHHQKLLSTSLMLPTFQSSETRSIHQPGGRPLRVYTDIPHVEEYLTHPKFAITKEPKDADIIWTSVQVDEDMKKATGITDQQYINQFPFEACLVMKHHLAETIQKAHGSPQWLQPTYNLETHLSQLIGDYCVRKKEGLDNLWILKPWNMARTIDTTVTDNLPAIIRLMETGPKICQKYIEQPALFQGRKFDLRYILLVRSMHPLEIFLSDCFWVRIANNQYSLDRSSLFEYETHFTVMNYRGAINHKNASDFVREFEEEHQVKWLDIHTRVRKIIRSVFEAAAVTHPEMHSPTSRAMYGVDVMLDSSFQPKLLEVTYCPDCTRACKYDMDIVVGEGGVAKASDFFNNVFRCLFLNEISQVSPL* 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1469 874 Pfam Tubulin-tyrosine ligase family 592 842 IPR004344 GO:0036211
Gso15g1469 874 Gene3D Ribonuclease Inhibitor 127 248 IPR032675 -
Gso15g1469 874 PANTHER TUBULIN--TYROSINE LIGASE-LIKE PROTEIN 12 13 873 IPR027749 -
Gso15g1469 874 SUPERFAMILY RNI-like 158 365 - -
Gso15g1469 874 Gene3D Ribonuclease Inhibitor 265 370 IPR032675 -
Gso15g1469 874 ProSiteProfiles TTL domain profile. 538 866 IPR004344 GO:0036211
Gso15g1469 874 Coils Coil 133 153 - -
Gso15g1469 874 Gene3D - 668 855 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1469 K16609 - gmx:100809212 1780.38