Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1409 ATGGTGGTGAGGATTCGGCTATCCCGGTTGGGATGTAAGAACAAACCCTTCTATCGGGTCATGGCCGCTGATAGCAGATCCCCTAGAGATGGCAAACACCTCGAAGTTCTCGGTTACTACAATCCCTTACCAGGTCAAGATGGTGGCAAGAGAATGGGTCTCAACTTCGACAGAGTGAAGTATTGGCTTTCTGTTGGAGCTCAGCCTTCGGAGCCTGTGGAGCGGCTTCTATTCCGAGCTGGAATGCTGCCCCCACCTCCGATGGTGGCAATGGGGCGTAAAGGTGGACCACGTGATACTCGCCCAGTTGATGCTCTCACTGGACGTGTGCTAAATCAAGAAAAGGCAGCTAATGCCAATAACAATGAGCAGCAGCATGACACTCCTGAAAACCCTTAA 399 0.5163 MVVRIRLSRLGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRVKYWLSVGAQPSEPVERLLFRAGMLPPPPMVAMGRKGGPRDTRPVDALTGRVLNQEKAANANNNEQQHDTPENP* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1409 132 TIGRFAM S16: ribosomal protein bS16 3 82 IPR000307 GO:0003735|GO:0005840|GO:0006412
Gso15g1409 132 SUPERFAMILY Ribosomal protein S16 3 94 IPR023803 -
Gso15g1409 132 Pfam Ribosomal protein S16 9 70 IPR000307 GO:0003735|GO:0005840|GO:0006412
Gso15g1409 132 Gene3D - 1 131 IPR023803 -
Gso15g1409 132 PANTHER 30S RIBOSOMAL PROTEIN S16 1 118 IPR000307 GO:0003735|GO:0005840|GO:0006412
Gso15g1409 132 PANTHER 30S RIBOSOMAL PROTEIN S16-LIKE 1 118 - -
Gso15g1409 132 Hamap 30S ribosomal protein S16 [rpsP]. 2 80 IPR000307 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1409 Gso-Chr15 15570419 15571975 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1409 K02959 - gmx:100305630 263.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1409 15 15570419 15571975 Gso9g0544 9 6155412 6157548 GST