Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1323 ATGCAAGTCTCCTCAATCTGTTTACCAGCTAAGGTTCCAGTTCGCGTGAAGTCACTGCACACGAACCCAGCAACCGTAAACGACCCCACTTCCACGGCCAAGGTGGCTGCTCCTAAGTGGGCCCAGAAGACAATAACTTTGCCTCCCCTTAAACGTGGTTGTCATTTAATCACTTCTAAGATAGTGAAAGAAGTTCGGCAAGAATTGTCTGAATACCAGTGTGGCCTGGCCCATCTCTTCTTGCATCACACAAGTGCTTCTCTTACCATCAATGAGAATTATGACTATGATGTTCGGGATGATACAGAAACCTTCCTCAATGGGATAGTTCCAGAGGGACCATCTGCGCCTTGGAAGCATACTCTAGAGGGGCCAGATGACATGCCGGCACATATTAAATCGTCGATGTTTGGTTGTGCACTCATGATACCCATTTCAAATGGAAAGCTTAATATGGGGACATGGCAGGTACGTCCCTCCGCTTCAATGTAG 492 0.4736 MQVSSICLPAKVPVRVKSLHTNPATVNDPTSTAKVAAPKWAQKTITLPPLKRGCHLITSKIVKEVRQELSEYQCGLAHLFLHHTSASLTINENYDYDVRDDTETFLNGIVPEGPSAPWKHTLEGPDDMPAHIKSSMFGCALMIPISNGKLNMGTWQVRPSASM* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1323 163 Pfam Uncharacterised protein family UPF0047 57 156 IPR001602 -
Gso15g1323 163 TIGRFAM TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 51 156 IPR001602 -
Gso15g1323 163 PANTHER UNCHARACTERIZED PROTEIN YJBQ-RELATED 14 156 IPR001602 -
Gso15g1323 163 SUPERFAMILY YjbQ-like 40 156 IPR035917 -
Gso15g1323 163 PANTHER - 14 156 - -
Gso15g1323 163 Gene3D - 30 157 IPR035917 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1323 Gso-Chr15 13780995 13802184 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1323 - - gmx:100500593 326.635