Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1322 ATGGCAGCAACCATTCCTTTCTCTCTGCTTAGGAACTGCGCGCCATTGAAACTAGCAACACCTTTCGCTCGCAAAGCCTCCAACTTTAATCTTCTTCTCCCTCTTCAACCACGCAGGTTGGTCTCTAGTACCTGTGCTGTGAACAATGAAGAGGCTGCAGCAAAAACAGCAGCTGTTAATTTTGATAGTGAAGCTCCAACAATATTTGATAAGATCATAAATAAGGAAATCCCTTCGAGCATTGTATATGAGGATGAAAAGGTTCTTGCATTTCGTGACATTAATCCACAGGCTCCGGTTCATGTCCTAGTCATTCCAAAATTAAGAGATGGATTAACACAACTTGGGAAGGCTGATAGTAGGCATGGGGAAATATTGGGTCAACTTCTGTATGCTGCCAAAATTGTAGCTGAGAAAGAAGGTATTGATGATGGATTCCGTGTCGTCATCAACAATGGTCCCAGTGCCTGTCAATCTGTGTATCATCTGCACTTGCATGTATTAGGTGGCAGACAGATGAATTGGCCACCTGGTTGA 537 0.4339 MAATIPFSLLRNCAPLKLATPFARKASNFNLLLPLQPRRLVSSTCAVNNEEAAAKTAAVNFDSEAPTIFDKIINKEIPSSIVYEDEKVLAFRDINPQAPVHVLVIPKLRDGLTQLGKADSRHGEILGQLLYAAKIVAEKEGIDDGFRVVINNGPSACQSVYHLHLHVLGGRQMNWPPG* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1322 178 PRINTS Histidine triad family signature 68 84 IPR001310 -
Gso15g1322 178 PRINTS Histidine triad family signature 89 107 IPR001310 -
Gso15g1322 178 PRINTS Histidine triad family signature 158 168 IPR001310 -
Gso15g1322 178 PANTHER HISTIDINE TRIAD NUCLEOTIDE-BINDING PROTEIN 1 32 178 - -
Gso15g1322 178 ProSitePatterns HIT domain signature. 151 169 IPR019808 -
Gso15g1322 178 Gene3D - 45 178 IPR036265 -
Gso15g1322 178 Pfam HIT domain 75 172 IPR011146 GO:0003824
Gso15g1322 178 CDD PKCI_related 66 170 - -
Gso15g1322 178 PANTHER HISTIDINE TRIAD HIT PROTEIN 32 178 IPR001310 -
Gso15g1322 178 SUPERFAMILY HIT-like 66 177 IPR036265 -
Gso15g1322 178 ProSiteProfiles HIT domain profile. 68 178 IPR011146 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1322 Gso-Chr15 13768384 13771574 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1322 - - gmx:100500187 352.443