Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1292 ATGAGATTCTCAGTCTTAACCTTTCTCTTATTCTTATTGGTAGCACAAGAAGCCACTTGCTTCAACAAACACACAACACTCGCTCATTTCAGGAACATACTTAAGGATAGAATGGCCTTTGCCCTATCCCAACCACCCTCAGCATCTCCAGAAACCAAAATGAGTGGGAGAGTGGTGTACCCAGTTGAGTATGGTGCAGACCCTACAGGGGCACAAGAAAGCAGTGAAGCAATTCTAAAAGCTGTTGGAGATGCTTTTGGGATTCTGAGTGAACTTGAGTTGGTGGCAGGAGTTAAAGACCTTGGAGGGGTTGTGATTGATCTTCAAGGTGGAAACTACACAATCAGCAAACCCATCACATTTCCTTCATCTGGTGGTGGCAATATTGTGGTAAAAGGAGGAACATTGAGAGCTTCTGATTCATTCCCTACTGGTCGACATCTAGTTGAGTTATGGGCTCCAAATTCCCAAAAGCTTCCAAAAACATCAGTTTTGAACAGCATAAAACTTCAGCAACCTAATGGCATTTACTATGAAGACATAACATTTAGGGACATCCACTTTGATTCTAGCTACAAGGGTGGAGGGATATTCATTGTTGATTCTGTTAGAACAAGGATCAACAACTGCTTTTTCTTGCATTTCACCACAGAAGGGATTCTAGTCCAAGGTGGCCATGAGACCTTCATAACAAGCAGTTTCCTTGGGCAGCACTCAACAGTTGGTGGAGATCCAGGGGAGAGGGATTTCTCTGGCACTGCCATTGATCTTGCCAGCAATGACAATGCAATCACTGATGTTGCAATTTTCTCTGCAGCCATAGGGATTGTTCTTAGGGGTCAGGCCAACATGCTCACTGGGGTGCATTGTTATAACAAGGCCACAGGCTTTGGTGGCATTGGCATTTTGGTGAAACTAGTAGGGAATTCACAAACTAGAATTGATAATTGTTACATGGACTATACAGGTATAGTCATGGAAGATCCTGTTCAAGTTCATGTCACTAATGGGTTTTTCTTAGGGGATGCTAACATAGTTTTGAAGTCAATTAAGGGGCAAGTTTCTGGTTTGAATATAGTTAACAATATGTTCACTGGGAACCCCAATAATAAGGTTCCAATTGTGACCCTAGATGGCCAATTCAGTAACATTGACCAAGTGGCGATTGATAGGAACAATGTGATTGGCATGAGCTTGAGATCAACAGTTGGGAAGTTAACTGTGACTGGAAATGGCACACAGTGGGTGGCTGATTTTTCAAACGTTTTGCTATTCCCAAATAGGATTAGCAATTTTCAGTACTCATTTTATGCACAAGGGGAGCCAAAGTTTTTGGCACATTCGGTCACCAATGTGACTAATAATGTTGTAGTTGTGGAAAGTGAGAAATCAGCTCAAGGGGTTGTTTCCTTCTTCGTTGAACAATGA 1428 0.423 MRFSVLTFLLFLLVAQEATCFNKHTTLAHFRNILKDRMAFALSQPPSASPETKMSGRVVYPVEYGADPTGAQESSEAILKAVGDAFGILSELELVAGVKDLGGVVIDLQGGNYTISKPITFPSSGGGNIVVKGGTLRASDSFPTGRHLVELWAPNSQKLPKTSVLNSIKLQQPNGIYYEDITFRDIHFDSSYKGGGIFIVDSVRTRINNCFFLHFTTEGILVQGGHETFITSSFLGQHSTVGGDPGERDFSGTAIDLASNDNAITDVAIFSAAIGIVLRGQANMLTGVHCYNKATGFGGIGILVKLVGNSQTRIDNCYMDYTGIVMEDPVQVHVTNGFFLGDANIVLKSIKGQVSGLNIVNNMFTGNPNNKVPIVTLDGQFSNIDQVAIDRNNVIGMSLRSTVGKLTVTGNGTQWVADFSNVLLFPNRISNFQYSFYAQGEPKFLAHSVTNVTNNVVVVESEKSAQGVVSFFVEQ* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1292 475 SUPERFAMILY Pectin lyase-like 45 452 IPR011050 -
Gso15g1292 475 PANTHER POLYGALACTURONASE QRT3-LIKE PROTEIN 1 475 - -
Gso15g1292 475 PANTHER POLYGALACTURONASE QRT3 1 475 IPR039279 GO:0004650
Gso15g1292 475 Gene3D - 62 470 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1292 Gso-Chr15 13288650 13294029 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1292 - - gmx:100802482 912.524