Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1290 ATGTATTCTGCCACTGCCTCCAACACTTTCTTCCTTCTCTCTTGTTTCCTTCTCTTCTGTCTCCTCTCAGCTCCTTCCTGTGTTTCCATGTTCTCTGGTATTGAGACAGGAGATTTAGAAAAAAGAGATGATTTGTTTCCACAGATTCTAAGAGACGAGGCAGTTGCAAGGCTTTATGAGCTTGGGAAGGTGAGTGATGCTAGTGGTTATTTGGAGAGGACATTCTTGAGTCCTGCATCCATGAAGGCAATTGATCTTATTCGTAAATGGATGGAGGATGCTGGTTTGAGAACTTGGGTGGACCAAATGGGAAATGTACATGGTCGAGTTGATGGTGCAAATGAAAATGCTGAAGCTTTATTGATTGGATCTCACATGGACACTGTTGTTGATGCTGGGATGTTTGATGGATCACTAGGAATTGTCTCTGCAATATCTGCCGTGAAGGCTATGCATGTCAATGGAAAGCTGCAAAAGCTAAAGCGCCCCGTTGAGGTGATTGCATTTAGTGATGAAGAGGGTGTCAGATTTCAAACTACTTTCTTGGGAAGTGGTGCTATAGCTGGTATTTTACCTGGTACAACATTGGAGATATCTGATAAGAGGGAGGTGATGATTAAAGATTTTCTCAAGGAGAACTCAATGGACATTACAGAAGAAAGTCTTTTAAAGCTCAAGTATGACCCAAAGTCTATTTGGGGTTATGTTGAGGTTCACATTGAGCAGGGTCCTGTGCTAGAACAAGTTGGTTTCCCACTTGGTGTGGTTAAAGGCATAGCTGGGCAGACACGATTGAAGGTTACAGTTAGAGGTTCACAAGGTCATGCTGGAACTGTTCCAATGTCCATGCGCCAGGATCCTATGGCTGCTGCTGCGGAACAAATTGTAGTCTTGGAAAGCCTCTGTAAACACCCTGAAGAATATCTTTCTTATGATGGTCATTGCAGTGATTCAACAGTGAAATCACTGTCAAGCTCACTTGTTTGTACTGTTGGGGAGATATCAACATGGCCAAGTGCCAGTAATGTCATTCCAGGCCAGGTTACATATACCGTGGATATACGAGCGATAGATGACCTTGGACGTGAAGCTGTTATCTATGATTTATCGAAACAAATTTACCAAATATGTGACAAGCGTTCAGTTTCCTGCATTATTGAGCACAAGCATGATGCAGGTGCTGTGATTTGTGATTCGGATCTAAGTTCACAGCTCAAGTCAGCAGCTTATTCTGCACTCAAGAAGATGGAGGGTGACATTCAGGATGAAGTGCCAACATTAATGAGCGGAGCAGGGCATGATGCAATGGCAATATCTCACTTAACAAAGGTGGGAATGCTGTTTGTGCGTTGTCGCGGAGGCATAAGTCACTCTCCACAAGAGCATGTGCTAGATAATGATGTCTGGGCAGCTGGTTTAGCAACCTTGTCATTTCTGGAAAACCTATCATAA 1452 0.4339 MYSATASNTFFLLSCFLLFCLLSAPSCVSMFSGIETGDLEKRDDLFPQILRDEAVARLYELGKVSDASGYLERTFLSPASMKAIDLIRKWMEDAGLRTWVDQMGNVHGRVDGANENAEALLIGSHMDTVVDAGMFDGSLGIVSAISAVKAMHVNGKLQKLKRPVEVIAFSDEEGVRFQTTFLGSGAIAGILPGTTLEISDKREVMIKDFLKENSMDITEESLLKLKYDPKSIWGYVEVHIEQGPVLEQVGFPLGVVKGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMAAAAEQIVVLESLCKHPEEYLSYDGHCSDSTVKSLSSSLVCTVGEISTWPSASNVIPGQVTYTVDIRAIDDLGREAVIYDLSKQIYQICDKRSVSCIIEHKHDAGAVICDSDLSSQLKSAAYSALKKMEGDIQDEVPTLMSGAGHDAMAISHLTKVGMLFVRCRGGISHSPQEHVLDNDVWAAGLATLSFLENLS* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1290 483 CDD M20_bAS 55 480 - -
Gso15g1290 483 PANTHER ALLANTOATE DEIMINASE-RELATED 41 476 IPR010158 GO:0016813
Gso15g1290 483 SUPERFAMILY Bacterial exopeptidase dimerisation domain 261 393 IPR036264 -
Gso15g1290 483 SUPERFAMILY Zn-dependent exopeptidases 46 482 - -
Gso15g1290 483 TIGRFAM hydantase: amidase, hydantoinase/carbamoylase family 55 475 IPR010158 GO:0016813
Gso15g1290 483 Pfam Peptidase dimerisation domain 261 372 IPR011650 -
Gso15g1290 483 Pfam Peptidase family M20/M25/M40 121 471 IPR002933 GO:0016787
Gso15g1290 483 Gene3D Zn peptidases 65 472 - -
Gso15g1290 483 PANTHER ALLANTOATE DEIMINASE-RELATED 41 476 - -
Gso15g1290 483 ProSitePatterns ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 120 129 IPR001261 -
Gso15g1290 483 Gene3D - 261 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1290 Gso-Chr15 13234750 13239219 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1290 K02083 - gmx:100137075 939.488
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1290 15 13234750 13239219 Gso9g0435 9 4340125 4344595 GST