Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1289 ATGTCATTATTGGCTAAACTACGTTGTGTCACTATAGATGTCACTGGTACCCTAATGGCTTACAAAGGGGAGCTCGGTGACTATTATTGCATGGCAGCCAAAGCTGCAGGCAAACCATGCCCAGACTACCAACGTATGCACGAGGGCTTTAAGCTTGCATATAAGGAAATGGCAAAGAATTATCCATGTTTTGGGCATGCAGCCAAAATGCCAAACATTGTGTGGTGGAAAACCTGTGTGCGAGATTCTTTTGTCAGGGCTGGATATGAATATGATGAAGAGACATTTGAGAAAATCTTCAGACGTATATATGCATCCTTTGGTTCATCTGCTCCGTATACTGTATTTCCAGACTCCCAACCATTTCTTAGATGGCTTCGTGGAGAGGGTCTCAAAGTTGGTATTGTGAGCAATGCTGAGTATCGATATCAAGATGTAATTCTTCCAGCTTTGGGTTTAAACGAGGGATCTGAGTGGGATTTTGGCGTGTTTTCCGGCCTTGAAGGTGTCGAGAAACCAAACCCGAAAATTTACGAGATTGCACTTGAGAGGGCTGGAAACATTGCACCTGAAGAAGCTTTGCACATTGGGGACAGCATGCGCAAAGACTATGAGCCAGCTAAGAGCATAGGGATGCATGCACTATTGTTGGATAGGTTTAAGACCCCAGATGCTGTGGAATGGAGGAAATCTGGGGCAGTTGTTCTTCCTGATTTATTGGCAGCAAAAGAATGGCTGTCTTCAGATAAGTCAAATTGCTAG 762 0.4423 MSLLAKLRCVTIDVTGTLMAYKGELGDYYCMAAKAAGKPCPDYQRMHEGFKLAYKEMAKNYPCFGHAAKMPNIVWWKTCVRDSFVRAGYEYDEETFEKIFRRIYASFGSSAPYTVFPDSQPFLRWLRGEGLKVGIVSNAEYRYQDVILPALGLNEGSEWDFGVFSGLEGVEKPNPKIYEIALERAGNIAPEEALHIGDSMRKDYEPAKSIGMHALLLDRFKTPDAVEWRKSGAVVLPDLLAAKEWLSSDKSNC* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1289 253 PANTHER OS02G0173600 PROTEIN 1 252 - -
Gso15g1289 253 CDD HAD_dREG-2_like 119 227 - -
Gso15g1289 253 Gene3D - 23 108 IPR044924 -
Gso15g1289 253 Pfam haloacid dehalogenase-like hydrolase 8 210 - -
Gso15g1289 253 TIGRFAM HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 128 211 IPR006439 -
Gso15g1289 253 SUPERFAMILY HAD-like 7 246 IPR036412 -
Gso15g1289 253 Gene3D - 10 221 IPR023214 -
Gso15g1289 253 TIGRFAM DREG-2: HAD hydrolase, REG-2-like, family IA 8 216 IPR011949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1289 Gso-Chr15 13223178 13226966 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1289 - - gmx:100800884 527.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1289 15 13223178 13226966 Gso9g0434 9 4327417 4331413 GST