Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1275 ATGGACAACATAGAACACCATCATCATGAAGATCAAAAAAGTATGACAAACAAGAGGTATAGGCCCCTCTTGTTTCTAAATTATGTTTTGCTCTTTGTGGGGTCAGTCTCCTCTAGTTTGCTCACAAAATATTACTTTAACCACAAAGGATCTAGCAAATGGGTCTCTTCATGGGTCCAGTGTGCAGGTTTTCCCTTCCTAGTCATTCCCATTTTTCTCCCAAGTCTCCTCAATTACACTGAGAGGAAGCCCTTCTCAGATTTCACTCCAAAGATGTTATGGTATTCATTTTGTGTTGGTGTTATGTTAGGGTTTAATAACCTTCTGTACTCATGGGGTGTGGCATATCTCCCAATCTCAACCTCAGGAATTCTCTTATCCTTTCAGCTTGCTTTCACCCTCATTCTCTCAGCCATCATTGTAAAACAAAAAATCACATTTTCAAATCTTAATTCTATGATCCTCATCACCATGAGTTCCGCCATTCTAGCCTTTAACTCTAGTCACGAGAAGTCAGAAGGGCTAACCCAAAAGGACTACATCATAGGGTTCTCTTGCACCATAGGTGCAAGCTTCTTGTTTTCCTTGTACTTGCCACTGATGGAGAGGATCTACGAGAGGGTTTACTGCTACGAAATGGTGATGGAGATGCAGATCATAATGGAGATTGCGGCCACGGCGTTAGTCACTGGAGGCATGGTGTACAAAGGAGGGTTTTCTGAGATGAGGGAAGAAGCTGAGAGGGTTTTTGACAAGGGATCCACTTTTTACTGGTTGACGGTTGTGTCAAGTGTGGTGACATGGCAGTGTTGCTACATGGGAACTGCAGGGTTGGTCTTTCTCACATCTTCAGTAACTGGAGGGGTTTCTGCTAATGCTTTGTTGTCCCTGAATGTGTTGGCAGGGTGGTTTGTGTACCATGATGCCTTCAATGGTTTTAAGATTGTGGCCACTGTTTTGTGCATTTGGGGCTTCTGCTCTTATGTCTATTGCATGTACTTTAAAAGGAGGCAAGAGGAGGCAGCTGAAAGAAGGAACAGCAGTGGTGGATCTACCACAGAGTTGGTAGTTAAATAG 1077 0.4336 MDNIEHHHHEDQKSMTNKRYRPLLFLNYVLLFVGSVSSSLLTKYYFNHKGSSKWVSSWVQCAGFPFLVIPIFLPSLLNYTERKPFSDFTPKMLWYSFCVGVMLGFNNLLYSWGVAYLPISTSGILLSFQLAFTLILSAIIVKQKITFSNLNSMILITMSSAILAFNSSHEKSEGLTQKDYIIGFSCTIGASFLFSLYLPLMERIYERVYCYEMVMEMQIIMEIAATALVTGGMVYKGGFSEMREEAERVFDKGSTFYWLTVVSSVVTWQCCYMGTAGLVFLTSSVTGGVSANALLSLNVLAGWFVYHDAFNGFKIVATVLCIWGFCSYVYCMYFKRRQEEAAERRNSSGGSTTELVVK* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1275 358 PANTHER OS09G0467300 PROTEIN-RELATED 3 346 IPR030182 GO:0015211|GO:0016021
Gso15g1275 358 Pfam Purine nucleobase transmembrane transport 23 337 - -
Gso15g1275 358 PANTHER TRIOSE-PHOSPHATE TRANSPORTER FAMILY PROTEIN 3 346 - -
Gso15g1275 358 SUPERFAMILY Multidrug resistance efflux transporter EmrE 84 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1275 Gso-Chr15 12995534 12996903 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1275 3 330 Organic Solute Cotransporters AT1G30840 55.152 3.82e-121 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1275 - - gmx:100796097 706.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1275 15 12995534 12996903 Gso9g0410 9 4037488 4038986 GST