Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1272 ATGGGTTATTGGAAGTCTAAGGTTCTTCCCAAGATCAAGAAGGTTTTTGAGAAGAATAGCACCAAGAAAGCTGCTGCTGCTGAGGCCACCAAGTCCTTTGATGAGTCAAAGGAGGAATACAACAAAGCCTTTGAAGAAAAGAAGACTGAACTTCAAACTAAAGTAGTTGAAATATACGAGGCTTCATCAACTGAAATCAAAAGTTTGGTTAAAGAACCCAAGGAAGCTGGTTTGAAGAAGAACTCCACAGAAGTCCAGAAGTTCCTAGAAGAGCTTGTTAAAATTGATTTTCCGGGATCAAAGGCAGCATCTGAAGCATCTTCAAAGTTTGGACCAGCCTTGGCTTCAGGCTCAGTTTTCTTTGTGTTTGAGAAGGTGTCAACTTTCATTGTTACAGAAGAGAAAGATGTTGAAGCCCCTCCTGGAGTAGAAACTAAAACAGAAGAAGAAACAAGTAGTGTTGTCAAAGAGAGGGAGATAGTGGTTGAAGAAGAGAAAAAGAAAGAAAAAAAGGAAGAGGAAAAACCACAAGTAATAGAGACAAGTGATGAGAAAAAGGTGGAAGAAAAACCAGCTGAGACTTCTGCAAAAGGGGAAGAGAAACCTGCTGAAGAAGCTGCTGCAGTAGTTGAGCAAGCAGAACCACCAAAGCCTTGA 657 0.4079 MGYWKSKVLPKIKKVFEKNSTKKAAAAEATKSFDESKEEYNKAFEEKKTELQTKVVEIYEASSTEIKSLVKEPKEAGLKKNSTEVQKFLEELVKIDFPGSKAASEASSKFGPALASGSVFFVFEKVSTFIVTEEKDVEAPPGVETKTEEETSSVVKEREIVVEEEKKKEKKEEEKPQVIETSDEKKVEEKPAETSAKGEEKPAEEAAAVVEQAEPPKP* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1272 218 Coils Coil 154 174 - -
Gso15g1272 218 Pfam DREPP plasma membrane polypeptide 1 206 IPR008469 GO:0046658
Gso15g1272 218 MobiDBLite consensus disorder prediction 134 207 - -
Gso15g1272 218 MobiDBLite consensus disorder prediction 134 218 - -
Gso15g1272 218 Coils Coil 26 46 - -
Gso15g1272 218 PANTHER PLASMA MEMBRANE-ASSOCIATED CATION-BINDING PROTEIN 1 1 218 IPR008469 GO:0046658
Gso15g1272 218 PANTHER PLASMA MEMBRANE-ASSOCIATED CATION-BINDING PROTEIN 1 1 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1272 Gso-Chr15 12971835 12973264 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1272 - - gmx:100786734 315.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1272 15 12971835 12973264 Gso9g0406 9 4009950 4011455 GST