Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1271 ATGGATCCAACATTAGATGTATCTACTCCAAGTCCTAATGTCATAGAGGAGGATTTGAACTCTTTTTGGCAATCTATCTATGAAAATTCCAACAAAGTCCAAAAGCTTGAGGAGCAAGTTGCCGAGGTTCAAAAGTTCTACAGTACCATTAATGATCAAGTTAATGATGCCAAAGACAAAGGGCGGGAGAAGCACGTTATTGGCACCAAAAGGTCACAGCAAGGTGGATCAAGTAGGGAAGCTAATTCTTCAAACACAATGAAAGAGGTTATGCACCAGTTTTCCATAATATTTCATCAGATAACTCATCAAAGATGGGCTTGGCCCTTCATGGAACCTGTAGATGTTGAAGGTCTTGGGCTGCATGACTATTATCAGATTATCGAAAAGCCTATGGATTTCGGAACGATAAAAAGGAAAATGAATGCTAAGGATGGTTCTGGTTATAAGAACGTGCGTGAGATATATTCTGATGTCAGGTTGGTTTTTGAGAATGCAATGAAATACAACGGTGAAAAAAATGATGTCCACATTATGGCGAAGACATTGCTGGAAAAATTTGAGAAGAAATGGCTGCAGCTATTACCTAAAGTTGCTCAGGCGGAAAGAGAAAAGGAAGAAGCACGTGTGCTGTTGGAAGCGAAGCGTGCTCAAGAAGCTACTTATGCCAAAATGACAAAGGATATAAGACATGCGCTGTGCGATGTTGATGAGCAGTTAAAGAATCTCAAAGAAATGGTGATTAAAAAGTGCAGGAAACTATCAACTCATGAGAAACTGGCACTTAAGAAAAATTTAAGCAGACTGAATGGTGGCAATCTCCTCAAGGCAATGAGCATAATTCATGAGATTGACCCAACCTTCCAACATGATGCTCCACAGGTCGACCTTGACCTTGATCGTCAGAGTGACTTCATACTGTGGAAACTAAACCTTTTTACCAAAGAAGCACTGGAAGATCAAGACAAAGCTGCTGCTGAGGAGATGGCTGTTAACCACAACGTTAACACTGAGGACCAGAAAAACACCAACAAAAGGAGGAAACTGTGA 1050 0.4067 MDPTLDVSTPSPNVIEEDLNSFWQSIYENSNKVQKLEEQVAEVQKFYSTINDQVNDAKDKGREKHVIGTKRSQQGGSSREANSSNTMKEVMHQFSIIFHQITHQRWAWPFMEPVDVEGLGLHDYYQIIEKPMDFGTIKRKMNAKDGSGYKNVREIYSDVRLVFENAMKYNGEKNDVHIMAKTLLEKFEKKWLQLLPKVAQAEREKEEARVLLEAKRAQEATYAKMTKDIRHALCDVDEQLKNLKEMVIKKCRKLSTHEKLALKKNLSRLNGGNLLKAMSIIHEIDPTFQHDAPQVDLDLDRQSDFILWKLNLFTKEALEDQDKAAAEEMAVNHNVNTEDQKNTNKRRKL* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1271 349 PANTHER OSJNBA0053K19.4 PROTEIN 5 348 - -
Gso15g1271 349 PANTHER TRANSCRIPTION FACTOR GTE1-LIKE ISOFORM X1 5 348 IPR017413 GO:0005634|GO:0006355
Gso15g1271 349 Coils Coil 33 53 - -
Gso15g1271 349 MobiDBLite consensus disorder prediction 70 85 - -
Gso15g1271 349 SMART bromo_6 84 196 IPR001487 GO:0005515
Gso15g1271 349 PRINTS Bromodomain signature 105 118 IPR001487 GO:0005515
Gso15g1271 349 PRINTS Bromodomain signature 121 137 IPR001487 GO:0005515
Gso15g1271 349 PRINTS Bromodomain signature 158 177 IPR001487 GO:0005515
Gso15g1271 349 Gene3D - 51 216 IPR036427 GO:0005515
Gso15g1271 349 ProSiteProfiles NET domain profile. 244 325 IPR027353 -
Gso15g1271 349 Pfam Bromodomain 100 181 IPR001487 GO:0005515
Gso15g1271 349 ProSiteProfiles Bromodomain profile. 102 177 IPR001487 GO:0005515
Gso15g1271 349 SUPERFAMILY Bromodomain 77 198 IPR036427 GO:0005515
Gso15g1271 349 Pfam Bromodomain extra-terminal - transcription regulation 253 314 IPR027353 -
Gso15g1271 349 Gene3D - 248 324 IPR038336 -
Gso15g1271 349 Coils Coil 198 221 - -
Gso15g1271 349 MobiDBLite consensus disorder prediction 57 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1271 Gso-Chr15 12957137 12965463 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1271 - - gmx:100795037 701.819