Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gso15g1257 | ATGACCATGGAATACAGAACCTTAGAACTCAACATCATATCCGCAAAGGACATCAAGAATGTTAATCTCTTCTCCAAGATGGACGTATACGCCGCCGTTTCGCTCTCCGGTGACCCTCTCCACCCTCAGGGCGCCACCACCCACGTCCACAAAGACGCCGGCAGCAACCCCACGTGGAACTACCCCGTGAAATTCTCTGTCAACGAATCGCTGGCGAAGGAAAATCGTTTATCTCTTGAGATCAAGCTCATCTCCGACCGCACCCTCGGCGACACCGTCATCGGCACCGTCCATGTTCCTCTCAGGGAACTCCTGGATAACCCCGGCGATGACAGCTCCTTCCGCCAAGTCAGTTATCAGGTGATGAAGCAATCAAGAAAATCCAAGGGATCCTTGAATTTCTCCTACAAATTCGGCGAACATGTTCCCGCCCCGGCCGCCAAGACACCCAAAGCGGCCAAGGCGGGACAAGAGCCGGTGATGGCTTATCCTCCTGCTGGGGCGGGATCCAGTTCGATGCCCTATGGTACGCCACACCCTCCCCCGCCGCAGCAATATGCGGCGACGGGATATGGGTATCCACCTCAGCAGGTGCATGGTGGATACCCACCTCAAGCAGCATATGGGTACCCACCTCAGACCGGTTATGGATACCCACAACAGTCGGGTTATGGATATCCACAACAATCCGGATATGGGTACCCACCTCAGGCTCAGAAACCAAAGAAGAACAAATTTGGAATGGGATTGGGAGCAGGATTGCTTGGTGGTGCCTTGGGTGGAATGTTGATCGGAGACATGGTATCTGATGCTGCTGAATATGATGCGGGCTTTGATGATGCTGGTGGATTTGATTTTTAA | 861 | 0.5343 | MTMEYRTLELNIISAKDIKNVNLFSKMDVYAAVSLSGDPLHPQGATTHVHKDAGSNPTWNYPVKFSVNESLAKENRLSLEIKLISDRTLGDTVIGTVHVPLRELLDNPGDDSSFRQVSYQVMKQSRKSKGSLNFSYKFGEHVPAPAAKTPKAAKAGQEPVMAYPPAGAGSSSMPYGTPHPPPPQQYAATGYGYPPQQVHGGYPPQAAYGYPPQTGYGYPQQSGYGYPQQSGYGYPPQAQKPKKNKFGMGLGAGLLGGALGGMLIGDMVSDAAEYDAGFDDAGGFDF* | 287 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gso15g1257 | 286 | MobiDBLite | consensus disorder prediction | 167 | 187 | - | - | |
| Gso15g1257 | 286 | CDD | C2_SRC2_like | 7 | 134 | IPR044750 | GO:0006952 | |
| Gso15g1257 | 286 | ProSiteProfiles | C2 domain profile. | 1 | 114 | IPR000008 | - | |
| Gso15g1257 | 286 | SMART | C2_3c | 7 | 113 | IPR000008 | - | |
| Gso15g1257 | 286 | Pfam | C2 domain | 7 | 109 | IPR000008 | - | |
| Gso15g1257 | 286 | Gene3D | C2 domain | 6 | 139 | IPR035892 | - | |
| Gso15g1257 | 286 | PANTHER | PROTEIN SRC2 | 3 | 228 | - | - | |
| Gso15g1257 | 286 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 3 | 141 | IPR035892 | - | |
| Gso15g1257 | 286 | PANTHER | INGRESSION PROTEIN FIC1 | 3 | 228 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gso15g1257 | Gso-Chr15 | 12744863 | 12746057 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gso15g1257 | - | - | gmx:547451 | 438.343 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Gso15g1257 | 15 | 12744863 | 12746057 | Gso9g0396 | 9 | 3855865 | 3857081 | GST | |
| Gso7g2102 | 7 | 44888609 | 44889755 | Gso15g1257 | 15 | 12744863 | 12746057 | PCT | |
| Gso15g1257 | 15 | 12744863 | 12746057 | Gso7g2102 | 7 | 44888609 | 44889755 | PCT |