Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1194 ATGAGTCCAACATGGGTTTTTGTGTTAGGTATTATTGCAGCAATGTTGGTGGTTGTGAATGGACAATCATCAGTGAAGCCATTGGTGAAGACAGTGAAGGGGAAGAAGGTGTGTGACAAAGGGTGGGAGTGCAAGGGTTGGTCTGCTTATTGCTGCAATGAGACTATCTCCGATTACTTTCAGACATACCAGTTTGAGAACCTCTTCGCGAAGCGCAATTCGCCGGTGGCACATGCAGTCGGATTCTGGGACTACCGTTCTTTCATCACTGCTGCAGCACTGTATCAGCCTCTTGGCTTTGGCACCACTGGAGGAAAGACCAGTGGCCAGAAGGAGCTTGCTGCTTTCTTTGGCCATGTTGGCAGCAAGACCTCTTGTGGTTATGGGGTGGCTACAGGGGGACCCTTAGCCTGGGGCTTATGCTACAATAAGGAATTGAGTCCTGATAAATTCTACTGCGATGACTACTACAAATTAACCTACCCTTGTACTCCTGGTGCAGCATACTATGGCCGTGGTGCCATCCCACTTTACTGGAACTACAACTATGGAAAAGCTGGGGAAGCCTTGAAGGTGGATCTGTTGAACCATCCAGAATACATAGAACAAAATGCCACCTTAGCCTTCCAGGCTGCACTCTGGCAGTGGATGAACCCACCAGAGAAGCACCTACCATCACCCCACGATGTCTTTGTTGGCAACTGGAAACCCACAAAAAATGACACATTGTCCAAAAGGGTGCCTGGATTTGGTGCCACAATAAACTTGCTCTATGGGGACCAAACTTGTGGCCAGGGATCAGATAATGAGGCCATGAACAACATCATTTCACACTATCTTTATTACCTTGATCTCATAGGTGTTGGCAGAGAAGAGGCAGGACCTAATGAAGTACTCTCATGTGCTGAACAAGCTGCTTTTAAGCCCCCTGGCTCACCATCTTCTGCCACAAATTGA 957 0.4796 MSPTWVFVLGIIAAMLVVVNGQSSVKPLVKTVKGKKVCDKGWECKGWSAYCCNETISDYFQTYQFENLFAKRNSPVAHAVGFWDYRSFITAAALYQPLGFGTTGGKTSGQKELAAFFGHVGSKTSCGYGVATGGPLAWGLCYNKELSPDKFYCDDYYKLTYPCTPGAAYYGRGAIPLYWNYNYGKAGEALKVDLLNHPEYIEQNATLAFQAALWQWMNPPEKHLPSPHDVFVGNWKPTKNDTLSKRVPGFGATINLLYGDQTCGQGSDNEAMNNIISHYLYYLDLIGVGREEAGPNEVLSCAEQAAFKPPGSPSSATN* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1194 318 SUPERFAMILY Lysozyme-like 56 307 IPR023346 -
Gso15g1194 318 PANTHER - 8 310 - -
Gso15g1194 318 Pfam Chitinase class I 64 291 IPR000726 GO:0004568|GO:0006032|GO:0016998
Gso15g1194 318 CDD chitinase_GH19 64 301 - -
Gso15g1194 318 PIRSF Endochitinase 2 308 IPR016283 GO:0004568|GO:0005975
Gso15g1194 318 Gene3D Endochitinase, domain 2 144 203 - -
Gso15g1194 318 Gene3D - 64 307 - -
Gso15g1194 318 PANTHER CHITINASE-RELATED 8 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1194 Gso-Chr15 11862234 11864663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1194 23 307 Glycoside Hydrolase AT3G16920 81.754 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1194 - - gmx:100805300 679.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1194 15 11862234 11864663 Gso9g0328 9 3165191 3167404 GST