Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0538 ATGGGGTCGGGGATTAAGGTTTCGTTTTCTGTGTTGTGTTTGTTAGGGTTAGTCATTGTGGGTGATCATGCTGCGTATGCTCAAGACTCACCAACAGACTTTGTTAATGCACACAACGCTGCAAGATCACAGGTTGGTGTTCCAAATATAGTTTGGGATGACACAGTTGCGGCTTTTGCACAGAACTATGCTAACCAACGCAAAGGTGACTGCAAACTTGTCCACTCTGGTGGTGATGGAAAATACGGGGAGAATCTTGCCGGAAGCACCGGTAACCTAAGTGGTACAAATGCAGTGAAATTGTGGGTTGATGAGAAATCCAAGTATGACTACAATTCCAACACGTGCGTTGGTGGGGAGTGCAGGCACTACACTCAGGTTGTTTGGAAAAACTCTGTGCGTCTTGGATGTGGAAAAGTAAGGTGTGACAATGGAGGCACTTTCATTACTTGCAACTATGCTCCTCCTGGCAACTATGTTGGCCAAAGACCCTACTAA 498 0.4598 MGSGIKVSFSVLCLLGLVIVGDHAAYAQDSPTDFVNAHNAARSQVGVPNIVWDDTVAAFAQNYANQRKGDCKLVHSGGDGKYGENLAGSTGNLSGTNAVKLWVDEKSKYDYNSNTCVGGECRHYTQVVWKNSVRLGCGKVRCDNGGTFITCNYAPPGNYVGQRPY* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0538 165 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 4 165 IPR001283 -
Gso15g0538 165 CDD CAP_PR-1 31 165 - -
Gso15g0538 165 PRINTS Allergen V5/Tpx-1 family signature 50 68 IPR001283 -
Gso15g0538 165 PRINTS Allergen V5/Tpx-1 family signature 98 111 IPR001283 -
Gso15g0538 165 PRINTS Allergen V5/Tpx-1 family signature 121 137 IPR001283 -
Gso15g0538 165 PRINTS Allergen V5/Tpx-1 family signature 148 161 IPR001283 -
Gso15g0538 165 ProSitePatterns CRISP family signature 1. 122 132 IPR018244 GO:0005576
Gso15g0538 165 Pfam Cysteine-rich secretory protein family 35 153 IPR014044 -
Gso15g0538 165 PANTHER PATHOGENESIS-RELATED PROTEIN 1B-LIKE 4 165 - -
Gso15g0538 165 SUPERFAMILY PR-1-like 9 165 IPR035940 -
Gso15g0538 165 SMART SCP_3 29 161 IPR014044 -
Gso15g0538 165 Gene3D CAP 29 165 IPR035940 -
Gso15g0538 165 ProSitePatterns CRISP family signature 2. 148 159 IPR018244 GO:0005576
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0538 Gso-Chr15 4810046 4810828 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0538 K13449 - gmx:100807250 353.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0538 15 4810046 4810828 Gso15g0538 15 4810046 4810828 ECH
Gso15g0538 15 4810046 4810828 Gso11g2765 11 43479994 43480759 GST