Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0537 ATGGGGTTGTACAAGATTTCATTATGTCTATTGTGTGTGTTGGGGTTAGTCATTGTGGGTGATCATGTTGCGTATGCTCAAGACTCACCAACAGACTATGTTAATGCACACAACGCTGCAAGATCACAGGTTGGTGTTCCAAATATAGTTTGGGATAACGCAGTCGCTGCTTTTGCACAGAACTATGCTAACCAACGCAAAGGTGACTGCAAACTCGTCCACTCTGGTGGTGATGGAAAATACGGGGAGAATCTTGCAGGAAGTACCGGTAACCTAAGTGGGAAAGATGCAGTGCAATTGTGGGTGAATGAGAAATCCAAGTATAACTACAACTCCAACTCGTGTGTTGGTGGGGAGTGCCTGCACTACACTCAGGTCGTTTGGAGAAACTCTTTGCGCCTTGGATGTGCCAAAGTAAGGTGTAACAATGGAGGCACATTCATAGGTTGCAACTATGCTCCCCCTGGCAACTATATTGGCCAAAGACCATACTAA 495 0.4566 MGLYKISLCLLCVLGLVIVGDHVAYAQDSPTDYVNAHNAARSQVGVPNIVWDNAVAAFAQNYANQRKGDCKLVHSGGDGKYGENLAGSTGNLSGKDAVQLWVNEKSKYNYNSNSCVGGECLHYTQVVWRNSLRLGCAKVRCNNGGTFIGCNYAPPGNYIGQRPY* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0537 164 Pfam Cysteine-rich secretory protein family 34 152 IPR014044 -
Gso15g0537 164 PRINTS Allergen V5/Tpx-1 family signature 49 67 IPR001283 -
Gso15g0537 164 PRINTS Allergen V5/Tpx-1 family signature 97 110 IPR001283 -
Gso15g0537 164 PRINTS Allergen V5/Tpx-1 family signature 120 136 IPR001283 -
Gso15g0537 164 PRINTS Allergen V5/Tpx-1 family signature 147 160 IPR001283 -
Gso15g0537 164 PRINTS Venom allergen 5 signature 49 67 IPR002413 -
Gso15g0537 164 PRINTS Venom allergen 5 signature 95 110 IPR002413 -
Gso15g0537 164 PRINTS Venom allergen 5 signature 119 138 IPR002413 -
Gso15g0537 164 SMART SCP_3 28 160 IPR014044 -
Gso15g0537 164 Gene3D CAP 28 164 IPR035940 -
Gso15g0537 164 SUPERFAMILY PR-1-like 5 164 IPR035940 -
Gso15g0537 164 ProSitePatterns CRISP family signature 2. 147 158 IPR018244 GO:0005576
Gso15g0537 164 PANTHER PATHOGENESIS-RELATED PROTEIN 1B-LIKE 1 164 - -
Gso15g0537 164 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 1 164 IPR001283 -
Gso15g0537 164 CDD CAP_PR-1 30 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0537 Gso-Chr15 4806116 4806876 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0537 K13449 - gmx:100806194 334.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0537 15 4806116 4806876 Gso15g0537 15 4806116 4806876 ECH
Gso15g0537 15 4806116 4806876 Gso11g2767 11 43491286 43492051 GST