Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0535 ATGATGTCCCCATCCCATGTGATCCTATCCATATTTTTCTTGGTGTGTACAACAACACCACCACTGTCCCTTGCCCAGAACACCCCTCAAGACTTTCTTGATGTGCACAATCAGGCTCGTGCCGAGGTTGGTGTTGGTCCACTCTCATGGAACCACACCCTTCAAGCCTACGCTCAAAGGTATGCCAATGAGAGAATCCCTGACTGCAACCTCGAACACTCCATGGGACCCTTCGGCGAGAATCTCGCTGAAGGGTACGGCGAAATGAAGGGTTCGGATGCTGTCAAATTTTGGCTCACTGAGAAGCCTTACTATGACCACTACTCCAACGCTTGTGTCCATGATGAGTGCTTGCATTATACTCAGATTGTGTGGCGTGATTCTGTTCATCTTGGGTGTGCTAGAGCAAAGTGTAACAATGGCTGGGTGTTTGTTATTTGCAGCTATTCCCCACCAGGCAACATTGAAGGGGAACGACCTTATTGA 486 0.4897 MMSPSHVILSIFFLVCTTTPPLSLAQNTPQDFLDVHNQARAEVGVGPLSWNHTLQAYAQRYANERIPDCNLEHSMGPFGENLAEGYGEMKGSDAVKFWLTEKPYYDHYSNACVHDECLHYTQIVWRDSVHLGCARAKCNNGWVFVICSYSPPGNIEGERPY* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0535 161 Gene3D CAP 26 161 IPR035940 -
Gso15g0535 161 PANTHER - 1 161 - -
Gso15g0535 161 Pfam Cysteine-rich secretory protein family 33 149 IPR014044 -
Gso15g0535 161 CDD CAP_PR-1 29 161 - -
Gso15g0535 161 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 1 161 IPR001283 -
Gso15g0535 161 SMART SCP_3 27 157 IPR014044 -
Gso15g0535 161 PRINTS Allergen V5/Tpx-1 family signature 48 66 IPR001283 -
Gso15g0535 161 PRINTS Allergen V5/Tpx-1 family signature 94 107 IPR001283 -
Gso15g0535 161 PRINTS Allergen V5/Tpx-1 family signature 117 133 IPR001283 -
Gso15g0535 161 PRINTS Allergen V5/Tpx-1 family signature 144 157 IPR001283 -
Gso15g0535 161 SUPERFAMILY PR-1-like 26 161 IPR035940 -
Gso15g0535 161 ProSitePatterns CRISP family signature 2. 144 155 IPR018244 GO:0005576
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0535 Gso-Chr15 4794404 4795136 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0535 K13449 - gmx:100527778 352.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0535 15 4794404 4795136 Gso15g0535 15 4794404 4795136 ECH
Gso15g0535 15 4794404 4795136 Gso11g2772 11 43517962 43518700 GST