Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0516 ATGGAACTAGCTCAGCATAGAGTTATGGAGAATGGGGTAGGCGAGGAGATGGATGGTGAAACTTCAGCACGGGTTCCCCTCAGGGAGCGCCGAGTCTACCCTGCCCATCCTTCAGGCTTGGTGAGGAAGAGAGCTTATATATTTGATTGCATGGGGAACTTTTATCATAAAGATTGGGATCTAGCAGACCTTTTTCTAAAAGAAGAGAAGGAATCTGGTGTAGGAGAAGGTCGAGGGAACGAGTTTTCTTGGTACCATGTTGAACTACCGAAAGGAAATCAAAAGTTGTCACAATCTGCACAGGACCTGATTGGTGTTTTCTGCCCACCTTTGAAACTCCAAGACATTCTTTCACTTGTTAGCAATGGACCCTTTTGTGCACATGTAGATGGGGCACTTGTCTTCCGTGTTAATTCGCCCGGTCCTCCCTCCAGCGACTTCACGTTTAGGATTGCTGCTAGAGTTACGGAGCATTCAGTAATTACTGTGTCCTTGGGACGTGTTCCCAGGTTAGGCTTCTCCCGTGTGGGTGAATCTCTACTTTCCGAGATTCCTAGTGTTGAGAGTTTCTCTCCTTTAAGAGGTCAGCAGCAGGAAAGGACAGTGATCAAGGAGCATGTTCTTGAATTCTTATTGACTATGAATCACTCTGAGGAAGCTGACAACCCTGTGCCTAGATCTGTCTCAAATCTTGTAGTACACATAATTGACACACATGTAGATCAGATTCAAGACCTTGTGACGAAGCTTGAGATGGAGTTGGACTCCGTGGAGCTTGACTTGGATAAAGGTGGGTATGCTCTGAAGAAACAAATGCTAGACGACAGAAGATTCCCCAAACTGCATATTAATTTGCAGCGTCTCTTGCAGGTGATTGCCCATGGAGAGCAAGTATATCTCCGAGTCAAAGAAAAATGCTCTTCTAAAAGATGGTTTGCCAGTGATGACCTTAACTCCCTTGAAGAACTAATTGGAAGGTTAAGGAGGCTGAAGGAGAATGTGGGGTTTATAGTAAATCGTGTCACAGCAATTCAGGCTGGTCTAGACAGCTGGCAGTCAGAGCAAATAAACAGGAAGCTGTACTATCTTTCGTTCCTTTCAATAATATTCCTCCCTTTGTCCATCATAACAGGAGTCTTTGGCATGAATGTTGGAGGAGTTCCATGGACAGGTCAAAATGCTCCAGAGCTAAAAGACGGTTTTCGTAATGTCATATTACTTTGTGTTGCTATGTTATTTCTTGTACTACTCTGCTTCATTTTCCCGGCCCTTTATACCCGTATAGCGGCTTCCTGGCGAAATAAGAGAGCTATGGGAAGAAGCTGGTCACTGAACAGGAAGTCATTGCTCAGGAGATCATTAAGAATAGGAGAGCAGGAGCGAGGGGGCTATCTTCGGATTTGA 1404 0.4494 MELAQHRVMENGVGEEMDGETSARVPLRERRVYPAHPSGLVRKRAYIFDCMGNFYHKDWDLADLFLKEEKESGVGEGRGNEFSWYHVELPKGNQKLSQSAQDLIGVFCPPLKLQDILSLVSNGPFCAHVDGALVFRVNSPGPPSSDFTFRIAARVTEHSVITVSLGRVPRLGFSRVGESLLSEIPSVESFSPLRGQQQERTVIKEHVLEFLLTMNHSEEADNPVPRSVSNLVVHIIDTHVDQIQDLVTKLEMELDSVELDLDKGGYALKKQMLDDRRFPKLHINLQRLLQVIAHGEQVYLRVKEKCSSKRWFASDDLNSLEELIGRLRRLKENVGFIVNRVTAIQAGLDSWQSEQINRKLYYLSFLSIIFLPLSIITGVFGMNVGGVPWTGQNAPELKDGFRNVILLCVAMLFLVLLCFIFPALYTRIAASWRNKRAMGRSWSLNRKSLLRRSLRIGEQERGGYLRI* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0516 467 Coils Coil 240 260 - -
Gso15g0516 467 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 355 419 IPR045863 -
Gso15g0516 467 SUPERFAMILY CorA soluble domain-like 79 346 IPR045861 -
Gso15g0516 467 Pfam CorA-like Mg2+ transporter protein 215 420 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Gso15g0516 467 Gene3D Magnesium transport protein CorA, transmembrane region 225 351 - -
Gso15g0516 467 Gene3D Magnesium transport protein CorA, transmembrane region 352 424 - -
Gso15g0516 467 PANTHER OS08G0130000 PROTEIN 1 467 - -
Gso15g0516 467 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0516 Gso-Chr15 4637318 4642470 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0516 - - gmx:100817220 904.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0516 15 4637318 4642470 Gso15g0516 15 4637318 4642470 ECH
Gso15g0516 15 4637318 4642470 Gso11g2792 11 43667731 43674229 GST