Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0515 ATGGCCTCCTTGCTCCGCTCTCTCCGCCGCCGCGATGTCGCCTCCGCCTCCCTCTCTGCTTATCGCTCGTTAACGGGCAGCACCAAGCCAGCATATGTAGCTCACAACTGGTCTAGTTTGTCTCGACCATTCAGTTCAAGGCCTGCTGGAAACGATGTCATTGGTATTGATTTGGGTACAACCAATTCATGTGTTTCCGTTATGGAAGGAAAGAACCCCAAAGTTATTGAGAATTCTGAAGGTGCACGAACAACACCATCTGTGGTTGCTTTCAACCAGAAAGGGGAGCTGCTTGTAGGTACCCCAGCTAAGCGTCAAGCTGTAACTAACCCAACAAACACTCTCTTTGGTACCAAGCGGTTGATTGGTAGGCGCTTTGATGATGCTCAAACACAAAAGGAGATGAAAATGGTTCCATTCAAGATTGTTAAGGCTCCAAATGGAGATGCTTGGGTGGAAGCTAATGGGCAGCAGTATTCCCCTAGCCAAATTGGTGCCTTTGTTCTCACCAAGATGAAGGAAACTGCAGAAGCTTATCTAGGGAAGTCAATTTCTAAGGCTGTAATTACTGTACCAGCTTACTTCAACGATGCTCAGAGGCAGGCAACAAAAGATGCTGGTAGAATTGCAGGTCTTGACGTGCAGAGAATTATCAATGAGCCCACTGCTGCTGCACTTTCATATGGGATGAACAAGAAGGAGGGTCTCATTGCCGTTTTTGACCTTGGTGGTGGAACATTTGATGTGTCCATCTTAGAAATTTCTAATGGTGTTTTTGAGGTGAAAGCAACAAATGGTGACACTTTCTTGGGAGGAGAGGATTTTGACAATGCCTTGTTGGATTTTCTGGTGAATGAATTCAAAAGAACTGAGAGTATTGACCTTGCAAAGGACAGGCTTGCACTGCAGAGGCTTCGTGAAGCTGCTGAGAAAGCTAAGATCGAGCTGTCTTCAACATCTCAAACTGAGATCAACCTGCCTTTCATCACTGCTGATGCATCTGGTGCAAAGCATCTGAACATAACATTGACAAGATCGAAGTTTGAGGCTTTGGTGAATCACTTGATTGAAAGGACCAAGGCACCATGTAAAAGCTGCTTGAAGGATGCTAACATCTCTATCAAGGATGTTGATGAGGTTCTTCTTGTTGGAGGGATGACTCGAGTTCCTAAAGTCCAAGAGGTGGTTTCAGAGATCTTTGGAAAGTCTCCTAGCAAAGGAGTAAACCCTGATGAGGCAGTTGCCATGGGGGCAGCAATCCAAGGTGGTATTCTACGGGGGGATGTTAAAGAGCTACTACTCCTAGATGTAACACCACTCTCTCTCGGTATTGAGACTTTGGGTGGTATCTTTACAAGATTGATCAACCGCAACACTACTATTCCTACTAAGAAGAGTCAGGTCTTTTCAACGGCAGCTGACAATCAAACTCAGGTAGGTATCAAGGTGCTACAAGGCGAGCGGGAAATGGCTGCAGACAACAAAATGCTTGGAGAATTTGACCTTGTTGGTATTCCTCCTGCTCCCAGAGGTCTGCCTCAGATTGAGGTTACATTTGACATTGATGCCAATGGGATTGTTACTGTCTCTGCAAAAGACAAGTCCACTGGTAAAGAACAACAAATCACTATTCGGTCTTCCGGTGGACTCTCGGAAGATGAGATTGAAAAGATGGTCAAAGAAGCAGAGTTGCATGCTCAGAAAGACCAAGAGAGAAAGGCTCTCATTGACATTAGAAACAGTGCTGACACCACCATATATAGCATTGAGAAGAGTTTAGGTGAATACAGAGACAAGATTCCCAGTGAAGTGGCCAAAGAAATTGAGGATGCAGTTTCGGATCTGAGGAAGGCGATGTCAGAGGATAATGTTGATGAAATCAAGTCAAAGCTTGATGCTGCAAACAAAGCTGTATCCAAGATTGGAGAGCACATGTCAGGAGGTTCTAGTGGCGGTTCCTCAGCTGGTGGTTCTCAGGGTGGGGACCAGGCTCCCGAGGCAGAATACGAGGAGGTGAAGAAGTAA 2025 0.4573 MASLLRSLRRRDVASASLSAYRSLTGSTKPAYVAHNWSSLSRPFSSRPAGNDVIGIDLGTTNSCVSVMEGKNPKVIENSEGARTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTLFGTKRLIGRRFDDAQTQKEMKMVPFKIVKAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAEAYLGKSISKAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGMNKKEGLIAVFDLGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNALLDFLVNEFKRTESIDLAKDRLALQRLREAAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSKFEALVNHLIERTKAPCKSCLKDANISIKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVAMGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMAADNKMLGEFDLVGIPPAPRGLPQIEVTFDIDANGIVTVSAKDKSTGKEQQITIRSSGGLSEDEIEKMVKEAELHAQKDQERKALIDIRNSADTTIYSIEKSLGEYRDKIPSEVAKEIEDAVSDLRKAMSEDNVDEIKSKLDAANKAVSKIGEHMSGGSSGGSSAGGSQGGDQAPEAEYEEVKK* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0515 674 SUPERFAMILY Actin-like ATPase domain 53 233 IPR043129 -
Gso15g0515 674 PANTHER HEAT SHOCK 70 KDA PROTEIN, MITOCHONDRIAL 32 658 - -
Gso15g0515 674 Coils Coil 617 637 - -
Gso15g0515 674 TIGRFAM prok_dnaK: chaperone protein DnaK 53 645 IPR012725 GO:0005524|GO:0006457|GO:0051082
Gso15g0515 674 Pfam Hsp70 protein 53 645 IPR013126 GO:0005524|GO:0140662
Gso15g0515 674 ProSitePatterns Heat shock hsp70 proteins family signature 2. 239 252 IPR018181 -
Gso15g0515 674 SUPERFAMILY Actin-like ATPase domain 234 425 IPR043129 -
Gso15g0515 674 MobiDBLite consensus disorder prediction 646 660 - -
Gso15g0515 674 Gene3D Actin; Chain A, domain 4 272 359 - -
Gso15g0515 674 PRINTS 70kDa heat shock protein signature 52 65 - -
Gso15g0515 674 PRINTS 70kDa heat shock protein signature 80 92 - -
Gso15g0515 674 PRINTS 70kDa heat shock protein signature 103 111 - -
Gso15g0515 674 PRINTS 70kDa heat shock protein signature 187 207 - -
Gso15g0515 674 PRINTS 70kDa heat shock protein signature 245 255 - -
Gso15g0515 674 PRINTS 70kDa heat shock protein signature 377 393 - -
Gso15g0515 674 PRINTS 70kDa heat shock protein signature 408 428 - -
Gso15g0515 674 PRINTS 70kDa heat shock protein signature 431 450 - -
Gso15g0515 674 PRINTS 70kDa heat shock protein signature 512 528 - -
Gso15g0515 674 PANTHER HEAT SHOCK 70 KDA PROTEIN, MITOCHONDRIAL 36 656 - -
Gso15g0515 674 MobiDBLite consensus disorder prediction 638 674 - -
Gso15g0515 674 Gene3D - 550 647 IPR029048 -
Gso15g0515 674 CDD HSPA9-like_NBD 50 425 - -
Gso15g0515 674 Gene3D - 229 409 - -
Gso15g0515 674 Gene3D - 54 422 - -
Gso15g0515 674 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 425 549 IPR029047 -
Gso15g0515 674 Coils Coil 295 322 - -
Gso15g0515 674 PANTHER HEAT SHOCK PROTEIN 70KDA 36 656 IPR013126 GO:0005524|GO:0140662
Gso15g0515 674 PANTHER HEAT SHOCK PROTEIN 70KDA 32 658 IPR013126 GO:0005524|GO:0140662
Gso15g0515 674 ProSitePatterns Heat shock hsp70 proteins family signature 1. 56 63 IPR018181 -
Gso15g0515 674 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 427 583 IPR029047 -
Gso15g0515 674 Hamap Chaperone protein DnaK [dnaK]. 50 672 IPR012725 GO:0005524|GO:0006457|GO:0051082
Gso15g0515 674 ProSitePatterns Heat shock hsp70 proteins family signature 3. 380 394 IPR018181 -
Gso15g0515 674 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 577 649 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0515 Gso-Chr15 4632426 4635967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0515 53 657 Miscellaneous Gene Families AT5G42020 50.958 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0515 K04043 - gmx:100814039 1279.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0515 15 4632426 4635967 Gso15g0515 15 4632426 4635967 ECH